Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt28A6BLY7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt28A6BLY7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt28A6BLY7 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.17■□□□□ 0.98
Krt28A6BLY7 Gm6433-201ENSMUST00000118634 875 ntBASIC21.17■□□□□ 0.98
Krt28A6BLY7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt28A6BLY7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt28A6BLY7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt28A6BLY7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Krt28A6BLY7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt28A6BLY7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt28A6BLY7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Krt28A6BLY7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Krt28A6BLY7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
Krt28A6BLY7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Krt28A6BLY7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt28A6BLY7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Krt28A6BLY7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Krt28A6BLY7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Krt28A6BLY7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Krt28A6BLY7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.15■□□□□ 0.98
Krt28A6BLY7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Krt28A6BLY7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Krt28A6BLY7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.15■□□□□ 0.98
Krt28A6BLY7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Krt28A6BLY7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Krt28A6BLY7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Krt28A6BLY7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Krt28A6BLY7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Krt28A6BLY7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Krt28A6BLY7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Krt28A6BLY7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Krt28A6BLY7 Gm10231-201ENSMUST00000181584 441 ntBASIC21.14■□□□□ 0.97
Krt28A6BLY7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Krt28A6BLY7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Krt28A6BLY7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Krt28A6BLY7 Gm10175-202ENSMUST00000208752 441 ntBASIC21.14■□□□□ 0.97
Krt28A6BLY7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Krt28A6BLY7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Krt28A6BLY7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Krt28A6BLY7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Krt28A6BLY7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt28A6BLY7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt28A6BLY7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Krt28A6BLY7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.13■□□□□ 0.97
Krt28A6BLY7 Mir5122-201ENSMUST00000175004 89 ntBASIC21.13■□□□□ 0.97
Krt28A6BLY7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Krt28A6BLY7 Gm43799-201ENSMUST00000201845 579 ntBASIC21.13■□□□□ 0.97
Krt28A6BLY7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt28A6BLY7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Krt28A6BLY7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Krt28A6BLY7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt28A6BLY7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.13■□□□□ 0.97
Krt28A6BLY7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Krt28A6BLY7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Krt28A6BLY7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.12■□□□□ 0.97
Krt28A6BLY7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.12■□□□□ 0.97
Krt28A6BLY7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Krt28A6BLY7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.12■□□□□ 0.97
Krt28A6BLY7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Krt28A6BLY7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Krt28A6BLY7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Krt28A6BLY7 Gm5417-201ENSMUST00000079706 384 ntBASIC21.12■□□□□ 0.97
Krt28A6BLY7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Krt28A6BLY7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Krt28A6BLY7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.12■□□□□ 0.97
Krt28A6BLY7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Krt28A6BLY7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Krt28A6BLY7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.11■□□□□ 0.97
Krt28A6BLY7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.11■□□□□ 0.97
Krt28A6BLY7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.11■□□□□ 0.97
Krt28A6BLY7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Krt28A6BLY7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Krt28A6BLY7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Krt28A6BLY7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Krt28A6BLY7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Krt28A6BLY7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Krt28A6BLY7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Krt28A6BLY7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Krt28A6BLY7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Krt28A6BLY7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Krt28A6BLY7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Krt28A6BLY7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Krt28A6BLY7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Krt28A6BLY7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Krt28A6BLY7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Krt28A6BLY7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.09■□□□□ 0.97
Krt28A6BLY7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Krt28A6BLY7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Krt28A6BLY7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Krt28A6BLY7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Krt28A6BLY7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Krt28A6BLY7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Krt28A6BLY7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.08■□□□□ 0.97
Krt28A6BLY7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Krt28A6BLY7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Krt28A6BLY7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.08■□□□□ 0.97
Krt28A6BLY7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Krt28A6BLY7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Krt28A6BLY7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms