Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Shroom2A2ALU4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
Shroom2A2ALU4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
Shroom2A2ALU4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Shroom2A2ALU4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Shroom2A2ALU4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Shroom2A2ALU4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Shroom2A2ALU4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
Shroom2A2ALU4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Shroom2A2ALU4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Shroom2A2ALU4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Shroom2A2ALU4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Shroom2A2ALU4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
Shroom2A2ALU4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Shroom2A2ALU4 AC107452.1-201ENSMUST00000227963 481 ntBASIC30.45■■■□□ 2.47
Shroom2A2ALU4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
Shroom2A2ALU4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Shroom2A2ALU4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Shroom2A2ALU4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Shroom2A2ALU4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC30.44■■■□□ 2.46
Shroom2A2ALU4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC30.44■■■□□ 2.46
Shroom2A2ALU4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC30.44■■■□□ 2.46
Shroom2A2ALU4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Shroom2A2ALU4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Shroom2A2ALU4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Shroom2A2ALU4 Gm18959-201ENSMUST00000208954 655 ntBASIC30.44■■■□□ 2.46
Shroom2A2ALU4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
Shroom2A2ALU4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Shroom2A2ALU4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
Shroom2A2ALU4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Shroom2A2ALU4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Shroom2A2ALU4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Shroom2A2ALU4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Shroom2A2ALU4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Shroom2A2ALU4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Shroom2A2ALU4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC30.42■■■□□ 2.46
Shroom2A2ALU4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Shroom2A2ALU4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Shroom2A2ALU4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
Shroom2A2ALU4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Shroom2A2ALU4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Shroom2A2ALU4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Shroom2A2ALU4 Gm7153-201ENSMUST00000117092 455 ntBASIC30.41■■■□□ 2.46
Shroom2A2ALU4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
Shroom2A2ALU4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
Shroom2A2ALU4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Shroom2A2ALU4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC30.4■■■□□ 2.46
Shroom2A2ALU4 AC154266.1-201ENSMUST00000223190 503 ntBASIC30.4■■■□□ 2.46
Shroom2A2ALU4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Shroom2A2ALU4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Shroom2A2ALU4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Shroom2A2ALU4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Shroom2A2ALU4 Gm7284-201ENSMUST00000131667 944 ntBASIC30.39■■■□□ 2.46
Shroom2A2ALU4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Shroom2A2ALU4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.45
Shroom2A2ALU4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Shroom2A2ALU4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Shroom2A2ALU4 Timm23-208ENSMUST00000226683 750 ntBASIC30.38■■■□□ 2.45
Shroom2A2ALU4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC30.38■■■□□ 2.45
Shroom2A2ALU4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
Shroom2A2ALU4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Shroom2A2ALU4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC30.38■■■□□ 2.45
Shroom2A2ALU4 Gm28033-201ENSMUST00000184224 96 ntBASIC30.38■■■□□ 2.45
Shroom2A2ALU4 AC140264.2-202ENSMUST00000218746 817 ntBASIC30.38■■■□□ 2.45
Shroom2A2ALU4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Shroom2A2ALU4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Shroom2A2ALU4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Shroom2A2ALU4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Shroom2A2ALU4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Shroom2A2ALU4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Shroom2A2ALU4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC30.37■■■□□ 2.45
Shroom2A2ALU4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Shroom2A2ALU4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Shroom2A2ALU4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Shroom2A2ALU4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Shroom2A2ALU4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC30.36■■■□□ 2.45
Shroom2A2ALU4 AC159205.6-201ENSMUST00000224935 887 ntBASIC30.36■■■□□ 2.45
Shroom2A2ALU4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Shroom2A2ALU4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Shroom2A2ALU4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC30.35■■■□□ 2.45
Shroom2A2ALU4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Shroom2A2ALU4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
Shroom2A2ALU4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Shroom2A2ALU4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Shroom2A2ALU4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
Shroom2A2ALU4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Shroom2A2ALU4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Shroom2A2ALU4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Shroom2A2ALU4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Shroom2A2ALU4 Gm43514-201ENSMUST00000198852 424 ntBASIC30.34■■■□□ 2.45
Shroom2A2ALU4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
Shroom2A2ALU4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Shroom2A2ALU4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Shroom2A2ALU4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Shroom2A2ALU4 Otx2os1-204ENSMUST00000227221 751 ntBASIC30.33■■■□□ 2.45
Shroom2A2ALU4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Shroom2A2ALU4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Shroom2A2ALU4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC30.33■■■□□ 2.45
Shroom2A2ALU4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Shroom2A2ALU4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms