Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv17A0A140T8P8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv17A0A140T8P8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trbv17A0A140T8P8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv17A0A140T8P8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv17A0A140T8P8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv17A0A140T8P8 Gm26833-201ENSMUST00000180899 440 ntBASIC14.53□□□□□ -0.08
Trbv17A0A140T8P8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trbv17A0A140T8P8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trbv17A0A140T8P8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv17A0A140T8P8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv17A0A140T8P8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv17A0A140T8P8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv17A0A140T8P8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.52□□□□□ -0.08
Trbv17A0A140T8P8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv17A0A140T8P8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv17A0A140T8P8 Golph3-202ENSMUST00000226517 2359 ntBASIC14.52□□□□□ -0.08
Trbv17A0A140T8P8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv17A0A140T8P8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.52□□□□□ -0.09
Trbv17A0A140T8P8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.52□□□□□ -0.09
Trbv17A0A140T8P8 Gm40848-201ENSMUST00000221998 324 ntBASIC14.52□□□□□ -0.09
Trbv17A0A140T8P8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv17A0A140T8P8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv17A0A140T8P8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trbv17A0A140T8P8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv17A0A140T8P8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trbv17A0A140T8P8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv17A0A140T8P8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv17A0A140T8P8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv17A0A140T8P8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trbv17A0A140T8P8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv17A0A140T8P8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trbv17A0A140T8P8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv17A0A140T8P8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.51□□□□□ -0.09
Trbv17A0A140T8P8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv17A0A140T8P8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv17A0A140T8P8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv17A0A140T8P8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trbv17A0A140T8P8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trbv17A0A140T8P8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.51□□□□□ -0.09
Trbv17A0A140T8P8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv17A0A140T8P8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv17A0A140T8P8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv17A0A140T8P8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv17A0A140T8P8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv17A0A140T8P8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv17A0A140T8P8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv17A0A140T8P8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.5□□□□□ -0.09
Trbv17A0A140T8P8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.5□□□□□ -0.09
Trbv17A0A140T8P8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trbv17A0A140T8P8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv17A0A140T8P8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv17A0A140T8P8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv17A0A140T8P8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trbv17A0A140T8P8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trbv17A0A140T8P8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv17A0A140T8P8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv17A0A140T8P8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv17A0A140T8P8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv17A0A140T8P8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv17A0A140T8P8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.49□□□□□ -0.09
Trbv17A0A140T8P8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Trbv17A0A140T8P8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv17A0A140T8P8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trbv17A0A140T8P8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv17A0A140T8P8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv17A0A140T8P8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv17A0A140T8P8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv17A0A140T8P8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv17A0A140T8P8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trbv17A0A140T8P8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv17A0A140T8P8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv17A0A140T8P8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv17A0A140T8P8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv17A0A140T8P8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv17A0A140T8P8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv17A0A140T8P8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trbv17A0A140T8P8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv17A0A140T8P8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv17A0A140T8P8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trbv17A0A140T8P8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv17A0A140T8P8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trbv17A0A140T8P8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv17A0A140T8P8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv17A0A140T8P8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
Trbv17A0A140T8P8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv17A0A140T8P8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv17A0A140T8P8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv17A0A140T8P8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv17A0A140T8P8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trbv17A0A140T8P8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.47□□□□□ -0.09
Trbv17A0A140T8P8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms