Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdv2-1A0A0G2JGB9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.94□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.93□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Gm27502-201ENSMUST00000183495 199 ntBASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trdv2-1A0A0G2JGB9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
Trdv2-1A0A0G2JGB9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trdv2-1A0A0G2JGB9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trdv2-1A0A0G2JGB9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trdv2-1A0A0G2JGB9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trdv2-1A0A0G2JGB9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Trdv2-1A0A0G2JGB9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trdv2-1A0A0G2JGB9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trdv2-1A0A0G2JGB9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trdv2-1A0A0G2JGB9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trdv2-1A0A0G2JGB9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trdv2-1A0A0G2JGB9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.89□□□□□ -0.19
Trdv2-1A0A0G2JGB9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trdv2-1A0A0G2JGB9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trdv2-1A0A0G2JGB9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trdv2-1A0A0G2JGB9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trdv2-1A0A0G2JGB9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trdv2-1A0A0G2JGB9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms