Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gm7143-201ENSMUST00000222811 859 ntBASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Trav9d-4A0A0G2JG37 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-4A0A0G2JG37 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav9d-4A0A0G2JG37 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-4A0A0G2JG37 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-4A0A0G2JG37 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Trav9d-4A0A0G2JG37 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-4A0A0G2JG37 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-4A0A0G2JG37 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-4A0A0G2JG37 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-4A0A0G2JG37 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9d-4A0A0G2JG37 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9d-4A0A0G2JG37 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav9d-4A0A0G2JG37 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-4A0A0G2JG37 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-4A0A0G2JG37 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-4A0A0G2JG37 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-4A0A0G2JG37 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-4A0A0G2JG37 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav9d-4A0A0G2JG37 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-4A0A0G2JG37 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-4A0A0G2JG37 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-4A0A0G2JG37 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav9d-4A0A0G2JG37 Rncr4-201ENSMUST00000194541 2234 ntBASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms