Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav13n-4A0A0G2JG01 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav13n-4A0A0G2JG01 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.33■□□□□ 0.05
Trav13n-4A0A0G2JG01 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.33■□□□□ 0.05
Trav13n-4A0A0G2JG01 Smad6-203ENSMUST00000179458 273 ntBASIC15.33■□□□□ 0.04
Trav13n-4A0A0G2JG01 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13n-4A0A0G2JG01 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav13n-4A0A0G2JG01 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13n-4A0A0G2JG01 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13n-4A0A0G2JG01 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13n-4A0A0G2JG01 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13n-4A0A0G2JG01 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13n-4A0A0G2JG01 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13n-4A0A0G2JG01 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13n-4A0A0G2JG01 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav13n-4A0A0G2JG01 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13n-4A0A0G2JG01 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13n-4A0A0G2JG01 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13n-4A0A0G2JG01 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13n-4A0A0G2JG01 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav13n-4A0A0G2JG01 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13n-4A0A0G2JG01 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav13n-4A0A0G2JG01 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.32■□□□□ 0.04
Trav13n-4A0A0G2JG01 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav13n-4A0A0G2JG01 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13n-4A0A0G2JG01 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13n-4A0A0G2JG01 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-4A0A0G2JG01 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-4A0A0G2JG01 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-4A0A0G2JG01 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-4A0A0G2JG01 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-4A0A0G2JG01 Gm42778-201ENSMUST00000199644 553 ntBASIC15.3■□□□□ 0.04
Trav13n-4A0A0G2JG01 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav13n-4A0A0G2JG01 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav13n-4A0A0G2JG01 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-4A0A0G2JG01 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-4A0A0G2JG01 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-4A0A0G2JG01 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-4A0A0G2JG01 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-4A0A0G2JG01 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13n-4A0A0G2JG01 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-4A0A0G2JG01 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-4A0A0G2JG01 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-4A0A0G2JG01 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-4A0A0G2JG01 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav13n-4A0A0G2JG01 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav13n-4A0A0G2JG01 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-4A0A0G2JG01 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-4A0A0G2JG01 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-4A0A0G2JG01 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav13n-4A0A0G2JG01 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-4A0A0G2JG01 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-4A0A0G2JG01 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13n-4A0A0G2JG01 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13n-4A0A0G2JG01 Gm11421-201ENSMUST00000122124 294 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms