Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.35■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.35■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.34■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.34■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.34■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Golph3-202ENSMUST00000226517 2359 ntBASIC18.33■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tcrg-V3A0A0G2JEW2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.33■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.33■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Gm10602-201ENSMUST00000098239 609 ntBASIC18.33■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.32■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.32■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.31■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.31■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Gm6365-201ENSMUST00000054711 744 ntBASIC18.31■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.3■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.3■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Mir5133-201ENSMUST00000174955 77 ntBASIC18.3■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.3■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.3■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tcrg-V3A0A0G2JEW2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms