Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trbv13-1A0A0B4J1P8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv13-1A0A0B4J1P8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv13-1A0A0B4J1P8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.07□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Trbv13-1A0A0B4J1P8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.07□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv13-1A0A0B4J1P8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.07□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.06□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.06□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-1A0A0B4J1P8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.06□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Gm42642-201ENSMUST00000200683 355 ntBASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.04□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms