Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 AC093043.1-201ENSMUST00000226700 898 ntBASIC13.73□□□□□ -0.21
Trbv16A0A0B4J1H3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv16A0A0B4J1H3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv16A0A0B4J1H3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Trbv16A0A0B4J1H3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv16A0A0B4J1H3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv16A0A0B4J1H3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv16A0A0B4J1H3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv16A0A0B4J1H3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv16A0A0B4J1H3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv16A0A0B4J1H3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv16A0A0B4J1H3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv16A0A0B4J1H3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv16A0A0B4J1H3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv16A0A0B4J1H3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv16A0A0B4J1H3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trbv16A0A0B4J1H3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv16A0A0B4J1H3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv16A0A0B4J1H3 Gm12922-201ENSMUST00000120626 809 ntBASIC13.72□□□□□ -0.21
Trbv16A0A0B4J1H3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv16A0A0B4J1H3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.72□□□□□ -0.21
Trbv16A0A0B4J1H3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv16A0A0B4J1H3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv16A0A0B4J1H3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv16A0A0B4J1H3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trbv16A0A0B4J1H3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv16A0A0B4J1H3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv16A0A0B4J1H3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv16A0A0B4J1H3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv16A0A0B4J1H3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv16A0A0B4J1H3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv16A0A0B4J1H3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbv16A0A0B4J1H3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Trbv16A0A0B4J1H3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv16A0A0B4J1H3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv16A0A0B4J1H3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv16A0A0B4J1H3 Gm45102-201ENSMUST00000207427 857 ntBASIC13.71□□□□□ -0.21
Trbv16A0A0B4J1H3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv16A0A0B4J1H3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv16A0A0B4J1H3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv16A0A0B4J1H3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trbv16A0A0B4J1H3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv16A0A0B4J1H3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv16A0A0B4J1H3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv16A0A0B4J1H3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv16A0A0B4J1H3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Rps24-207ENSMUST00000224568 714 ntBASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trbv16A0A0B4J1H3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv16A0A0B4J1H3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.69□□□□□ -0.22
Trbv16A0A0B4J1H3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trbv16A0A0B4J1H3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv16A0A0B4J1H3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv16A0A0B4J1H3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Trbv16A0A0B4J1H3 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.69□□□□□ -0.22
Trbv16A0A0B4J1H3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv16A0A0B4J1H3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trbv16A0A0B4J1H3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv16A0A0B4J1H3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trbv16A0A0B4J1H3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.69□□□□□ -0.22
Trbv16A0A0B4J1H3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv16A0A0B4J1H3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv16A0A0B4J1H3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv16A0A0B4J1H3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv16A0A0B4J1H3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms