Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-7A0A075B6A6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav6n-7A0A075B6A6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-7A0A075B6A6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.11■□□□□ 0.17
Trav6n-7A0A075B6A6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-7A0A075B6A6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-7A0A075B6A6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav6n-7A0A075B6A6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-7A0A075B6A6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 Gm13234-201ENSMUST00000120010 747 ntBASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 Gm42642-201ENSMUST00000200683 355 ntBASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-7A0A075B6A6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.08■□□□□ 0.17
Trav6n-7A0A075B6A6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6n-7A0A075B6A6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6n-7A0A075B6A6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6n-7A0A075B6A6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav6n-7A0A075B6A6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6n-7A0A075B6A6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6n-7A0A075B6A6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6n-7A0A075B6A6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.08■□□□□ 0.16
Trav6n-7A0A075B6A6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6n-7A0A075B6A6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav6n-7A0A075B6A6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6n-7A0A075B6A6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav6n-7A0A075B6A6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.07■□□□□ 0.16
Trav6n-7A0A075B6A6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6n-7A0A075B6A6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6n-7A0A075B6A6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.07■□□□□ 0.16
Trav6n-7A0A075B6A6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6n-7A0A075B6A6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav6n-7A0A075B6A6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-7A0A075B6A6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav6n-7A0A075B6A6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-7A0A075B6A6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-7A0A075B6A6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-7A0A075B6A6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-7A0A075B6A6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-7A0A075B6A6 Gm8495-201ENSMUST00000188740 694 ntBASIC16.06■□□□□ 0.16
Trav6n-7A0A075B6A6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-7A0A075B6A6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav6n-7A0A075B6A6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-7A0A075B6A6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 Gm18671-201ENSMUST00000214826 683 ntBASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-7A0A075B6A6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav6n-7A0A075B6A6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav6n-7A0A075B6A6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-7A0A075B6A6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-7A0A075B6A6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-7A0A075B6A6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-7A0A075B6A6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-7A0A075B6A6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms