Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Fst-202ENSMUST00000223640 2612 ntBASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 AC126028.2-201ENSMUST00000228100 1833 ntBASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav3-4A0A075B654 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-4A0A075B654 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-4A0A075B654 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-4A0A075B654 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-4A0A075B654 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-4A0A075B654 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav3-4A0A075B654 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Trav3-4A0A075B654 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Trav3-4A0A075B654 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-4A0A075B654 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav3-4A0A075B654 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav3-4A0A075B654 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-4A0A075B654 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav3-4A0A075B654 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav3-4A0A075B654 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-4A0A075B654 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-4A0A075B654 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-4A0A075B654 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-4A0A075B654 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-4A0A075B654 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-4A0A075B654 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-4A0A075B654 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav3-4A0A075B654 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav3-4A0A075B654 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav3-4A0A075B654 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms