Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16d-dv11A0A075B617 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav16d-dv11A0A075B617 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav16d-dv11A0A075B617 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav16d-dv11A0A075B617 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav16d-dv11A0A075B617 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16d-dv11A0A075B617 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16d-dv11A0A075B617 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav16d-dv11A0A075B617 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.95□□□□□ -0.18
Trav16d-dv11A0A075B617 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16d-dv11A0A075B617 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16d-dv11A0A075B617 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16d-dv11A0A075B617 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16d-dv11A0A075B617 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav16d-dv11A0A075B617 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Trav16d-dv11A0A075B617 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16d-dv11A0A075B617 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16d-dv11A0A075B617 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16d-dv11A0A075B617 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16d-dv11A0A075B617 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16d-dv11A0A075B617 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav16d-dv11A0A075B617 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16d-dv11A0A075B617 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav16d-dv11A0A075B617 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Gm10399-202ENSMUST00000202768 748 ntBASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16d-dv11A0A075B617 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16d-dv11A0A075B617 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms