Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-1A0A075B606 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 Reep4-203ENSMUST00000226563 1444 ntBASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-1A0A075B606 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-1A0A075B606 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-1A0A075B606 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-1A0A075B606 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-1A0A075B606 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-1A0A075B606 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Trav13d-1A0A075B606 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-1A0A075B606 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-1A0A075B606 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-1A0A075B606 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-1A0A075B606 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-1A0A075B606 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav13d-1A0A075B606 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-1A0A075B606 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13d-1A0A075B606 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Gm13234-201ENSMUST00000120010 747 ntBASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13d-1A0A075B606 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Gm37179-201ENSMUST00000194862 823 ntBASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-1A0A075B606 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-1A0A075B606 AA386476-201ENSMUST00000098781 1665 ntBASIC13.83□□□□□ -0.2
Trav13d-1A0A075B606 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms