Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav6-6A0A075B603 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6-6A0A075B603 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav6-6A0A075B603 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-6A0A075B603 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav6-6A0A075B603 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-6A0A075B603 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-6A0A075B603 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav6-6A0A075B603 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-6A0A075B603 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-6A0A075B603 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-6A0A075B603 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-6A0A075B603 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-6A0A075B603 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-6A0A075B603 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-6A0A075B603 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-6A0A075B603 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-6A0A075B603 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6-6A0A075B603 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6-6A0A075B603 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-6A0A075B603 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-6A0A075B603 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-6A0A075B603 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-6A0A075B603 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-6A0A075B603 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-6A0A075B603 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav6-6A0A075B603 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav6-6A0A075B603 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Trav6-6A0A075B603 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-6A0A075B603 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-6A0A075B603 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-6A0A075B603 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-6A0A075B603 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-6A0A075B603 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-6A0A075B603 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav6-6A0A075B603 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-6A0A075B603 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms