Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.67■□□□□ 0.42
Trav1A0A075B5Z4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav1A0A075B5Z4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav1A0A075B5Z4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav1A0A075B5Z4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav1A0A075B5Z4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
Trav1A0A075B5Z4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav1A0A075B5Z4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav1A0A075B5Z4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav1A0A075B5Z4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav1A0A075B5Z4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav1A0A075B5Z4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav1A0A075B5Z4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav1A0A075B5Z4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav1A0A075B5Z4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav1A0A075B5Z4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav1A0A075B5Z4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav1A0A075B5Z4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.66■□□□□ 0.42
Trav1A0A075B5Z4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav1A0A075B5Z4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav1A0A075B5Z4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav1A0A075B5Z4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Trav1A0A075B5Z4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav1A0A075B5Z4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trav1A0A075B5Z4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trav1A0A075B5Z4 Gm45417-201ENSMUST00000209533 758 ntBASIC17.64■□□□□ 0.41
Trav1A0A075B5Z4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav1A0A075B5Z4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav1A0A075B5Z4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav1A0A075B5Z4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav1A0A075B5Z4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav1A0A075B5Z4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav1A0A075B5Z4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav1A0A075B5Z4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav1A0A075B5Z4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav1A0A075B5Z4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Gm26833-201ENSMUST00000180899 440 ntBASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav1A0A075B5Z4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav1A0A075B5Z4 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.6■□□□□ 0.41
Trav1A0A075B5Z4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav1A0A075B5Z4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.6■□□□□ 0.41
Trav1A0A075B5Z4 Gm40848-201ENSMUST00000221998 324 ntBASIC17.6■□□□□ 0.41
Trav1A0A075B5Z4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav1A0A075B5Z4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav1A0A075B5Z4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav1A0A075B5Z4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms