Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Nr1h3Q9Z0Y9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1h3Q9Z0Y9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1h3Q9Z0Y9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1h3Q9Z0Y9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1h3Q9Z0Y9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1h3Q9Z0Y9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1h3Q9Z0Y9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1h3Q9Z0Y9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1h3Q9Z0Y9 Gm20760-201ENSMUST00000179197 648 ntBASIC20.68■□□□□ 0.9
Nr1h3Q9Z0Y9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.68■□□□□ 0.9
Nr1h3Q9Z0Y9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1h3Q9Z0Y9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1h3Q9Z0Y9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1h3Q9Z0Y9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.68■□□□□ 0.9
Nr1h3Q9Z0Y9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Nr1h3Q9Z0Y9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.68■□□□□ 0.9
Nr1h3Q9Z0Y9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1h3Q9Z0Y9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1h3Q9Z0Y9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.67■□□□□ 0.9
Nr1h3Q9Z0Y9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1h3Q9Z0Y9 Gm10653-202ENSMUST00000139570 835 ntBASIC20.67■□□□□ 0.9
Nr1h3Q9Z0Y9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1h3Q9Z0Y9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1h3Q9Z0Y9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1h3Q9Z0Y9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1h3Q9Z0Y9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nr1h3Q9Z0Y9 Gm13148-201ENSMUST00000118892 745 ntBASIC20.66■□□□□ 0.9
Nr1h3Q9Z0Y9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nr1h3Q9Z0Y9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.66■□□□□ 0.9
Nr1h3Q9Z0Y9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Nr1h3Q9Z0Y9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nr1h3Q9Z0Y9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Nr1h3Q9Z0Y9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nr1h3Q9Z0Y9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nr1h3Q9Z0Y9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nr1h3Q9Z0Y9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nr1h3Q9Z0Y9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr1h3Q9Z0Y9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Nr1h3Q9Z0Y9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.65■□□□□ 0.9
Nr1h3Q9Z0Y9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr1h3Q9Z0Y9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr1h3Q9Z0Y9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr1h3Q9Z0Y9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr1h3Q9Z0Y9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nr1h3Q9Z0Y9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr1h3Q9Z0Y9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nr1h3Q9Z0Y9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr1h3Q9Z0Y9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr1h3Q9Z0Y9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.64■□□□□ 0.9
Nr1h3Q9Z0Y9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nr1h3Q9Z0Y9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nr1h3Q9Z0Y9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Nr1h3Q9Z0Y9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.64■□□□□ 0.89
Nr1h3Q9Z0Y9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nr1h3Q9Z0Y9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nr1h3Q9Z0Y9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Nr1h3Q9Z0Y9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nr1h3Q9Z0Y9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nr1h3Q9Z0Y9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Nr1h3Q9Z0Y9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.64■□□□□ 0.89
Nr1h3Q9Z0Y9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nr1h3Q9Z0Y9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Nr1h3Q9Z0Y9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nr1h3Q9Z0Y9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nr1h3Q9Z0Y9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nr1h3Q9Z0Y9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nr1h3Q9Z0Y9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Nr1h3Q9Z0Y9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nr1h3Q9Z0Y9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nr1h3Q9Z0Y9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nr1h3Q9Z0Y9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nr1h3Q9Z0Y9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nr1h3Q9Z0Y9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nr1h3Q9Z0Y9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Nr1h3Q9Z0Y9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nr1h3Q9Z0Y9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Nr1h3Q9Z0Y9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Nr1h3Q9Z0Y9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nr1h3Q9Z0Y9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Nr1h3Q9Z0Y9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nr1h3Q9Z0Y9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nr1h3Q9Z0Y9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.61■□□□□ 0.89
Nr1h3Q9Z0Y9 Gm6211-202ENSMUST00000167849 925 ntBASIC20.61■□□□□ 0.89
Nr1h3Q9Z0Y9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nr1h3Q9Z0Y9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nr1h3Q9Z0Y9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.61■□□□□ 0.89
Nr1h3Q9Z0Y9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.61■□□□□ 0.89
Nr1h3Q9Z0Y9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nr1h3Q9Z0Y9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nr1h3Q9Z0Y9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nr1h3Q9Z0Y9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr1h3Q9Z0Y9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr1h3Q9Z0Y9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr1h3Q9Z0Y9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nr1h3Q9Z0Y9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr1h3Q9Z0Y9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nr1h3Q9Z0Y9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nr1h3Q9Z0Y9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr1h3Q9Z0Y9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms