Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Cldn13Q9Z0S4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cldn13Q9Z0S4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn13Q9Z0S4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn13Q9Z0S4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cldn13Q9Z0S4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn13Q9Z0S4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn13Q9Z0S4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn13Q9Z0S4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn13Q9Z0S4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn13Q9Z0S4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn13Q9Z0S4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.94■□□□□ 0.3
Cldn13Q9Z0S4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.94■□□□□ 0.3
Cldn13Q9Z0S4 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.94■□□□□ 0.3
Cldn13Q9Z0S4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn13Q9Z0S4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn13Q9Z0S4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn13Q9Z0S4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn13Q9Z0S4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn13Q9Z0S4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn13Q9Z0S4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn13Q9Z0S4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn13Q9Z0S4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn13Q9Z0S4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn13Q9Z0S4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn13Q9Z0S4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn13Q9Z0S4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.93■□□□□ 0.3
Cldn13Q9Z0S4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.93■□□□□ 0.3
Cldn13Q9Z0S4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.93■□□□□ 0.3
Cldn13Q9Z0S4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cldn13Q9Z0S4 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.93■□□□□ 0.3
Cldn13Q9Z0S4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn13Q9Z0S4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn13Q9Z0S4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cldn13Q9Z0S4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cldn13Q9Z0S4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn13Q9Z0S4 Gm8495-201ENSMUST00000188740 694 ntBASIC16.92■□□□□ 0.3
Cldn13Q9Z0S4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.92■□□□□ 0.3
Cldn13Q9Z0S4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn13Q9Z0S4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn13Q9Z0S4 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.92■□□□□ 0.3
Cldn13Q9Z0S4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cldn13Q9Z0S4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cldn13Q9Z0S4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn13Q9Z0S4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn13Q9Z0S4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn13Q9Z0S4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn13Q9Z0S4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn13Q9Z0S4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Cldn13Q9Z0S4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Cldn13Q9Z0S4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cldn13Q9Z0S4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn13Q9Z0S4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn13Q9Z0S4 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.91■□□□□ 0.3
Cldn13Q9Z0S4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn13Q9Z0S4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.9■□□□□ 0.3
Cldn13Q9Z0S4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn13Q9Z0S4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn13Q9Z0S4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn13Q9Z0S4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn13Q9Z0S4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn13Q9Z0S4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Cldn13Q9Z0S4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn13Q9Z0S4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn13Q9Z0S4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cldn13Q9Z0S4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn13Q9Z0S4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn13Q9Z0S4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn13Q9Z0S4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn13Q9Z0S4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn13Q9Z0S4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn13Q9Z0S4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn13Q9Z0S4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn13Q9Z0S4 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.89■□□□□ 0.29
Cldn13Q9Z0S4 Gm5874-201ENSMUST00000096101 508 ntBASIC16.89■□□□□ 0.29
Cldn13Q9Z0S4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.89■□□□□ 0.29
Cldn13Q9Z0S4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms