Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tubd1Q9R1K7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Tubd1Q9R1K7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Tubd1Q9R1K7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tubd1Q9R1K7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.46■□□□□ 0.71
Tubd1Q9R1K7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.46■□□□□ 0.71
Tubd1Q9R1K7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tubd1Q9R1K7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tubd1Q9R1K7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tubd1Q9R1K7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tubd1Q9R1K7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Gm18284-201ENSMUST00000172604 624 ntBASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubd1Q9R1K7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubd1Q9R1K7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Tubd1Q9R1K7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Tubd1Q9R1K7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubd1Q9R1K7 Gm10033-202ENSMUST00000211874 928 ntBASIC19.44■□□□□ 0.7
Tubd1Q9R1K7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubd1Q9R1K7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.44■□□□□ 0.7
Tubd1Q9R1K7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubd1Q9R1K7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Tubd1Q9R1K7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubd1Q9R1K7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 Iqck-206ENSMUST00000208658 2891 ntBASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubd1Q9R1K7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubd1Q9R1K7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tubd1Q9R1K7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubd1Q9R1K7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubd1Q9R1K7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tubd1Q9R1K7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubd1Q9R1K7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubd1Q9R1K7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.41■□□□□ 0.7
Tubd1Q9R1K7 Gm5874-201ENSMUST00000096101 508 ntBASIC19.41■□□□□ 0.7
Tubd1Q9R1K7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Tubd1Q9R1K7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tubd1Q9R1K7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubd1Q9R1K7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
Tubd1Q9R1K7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubd1Q9R1K7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tubd1Q9R1K7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tubd1Q9R1K7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubd1Q9R1K7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubd1Q9R1K7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubd1Q9R1K7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Tubd1Q9R1K7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubd1Q9R1K7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms