Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn2Q9R0A1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn2Q9R0A1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn2Q9R0A1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Clcn2Q9R0A1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn2Q9R0A1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn2Q9R0A1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn2Q9R0A1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn2Q9R0A1 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.43■□□□□ 0.7
Clcn2Q9R0A1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn2Q9R0A1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Clcn2Q9R0A1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn2Q9R0A1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn2Q9R0A1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn2Q9R0A1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Clcn2Q9R0A1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn2Q9R0A1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.42■□□□□ 0.7
Clcn2Q9R0A1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn2Q9R0A1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.42■□□□□ 0.7
Clcn2Q9R0A1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn2Q9R0A1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn2Q9R0A1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn2Q9R0A1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.42■□□□□ 0.7
Clcn2Q9R0A1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn2Q9R0A1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn2Q9R0A1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn2Q9R0A1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn2Q9R0A1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn2Q9R0A1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn2Q9R0A1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn2Q9R0A1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Clcn2Q9R0A1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn2Q9R0A1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Clcn2Q9R0A1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn2Q9R0A1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn2Q9R0A1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
Clcn2Q9R0A1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Clcn2Q9R0A1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.39■□□□□ 0.69
Clcn2Q9R0A1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn2Q9R0A1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.39■□□□□ 0.69
Clcn2Q9R0A1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn2Q9R0A1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Clcn2Q9R0A1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn2Q9R0A1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn2Q9R0A1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn2Q9R0A1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn2Q9R0A1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn2Q9R0A1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.38■□□□□ 0.69
Clcn2Q9R0A1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.38■□□□□ 0.69
Clcn2Q9R0A1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn2Q9R0A1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn2Q9R0A1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Clcn2Q9R0A1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn2Q9R0A1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn2Q9R0A1 Gm43017-201ENSMUST00000198296 752 ntBASIC19.38■□□□□ 0.69
Clcn2Q9R0A1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.38■□□□□ 0.69
Clcn2Q9R0A1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn2Q9R0A1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn2Q9R0A1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn2Q9R0A1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn2Q9R0A1 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.37■□□□□ 0.69
Clcn2Q9R0A1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Clcn2Q9R0A1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Clcn2Q9R0A1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn2Q9R0A1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn2Q9R0A1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.37■□□□□ 0.69
Clcn2Q9R0A1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Clcn2Q9R0A1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.37■□□□□ 0.69
Clcn2Q9R0A1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn2Q9R0A1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Clcn2Q9R0A1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn2Q9R0A1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn2Q9R0A1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn2Q9R0A1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn2Q9R0A1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn2Q9R0A1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn2Q9R0A1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn2Q9R0A1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn2Q9R0A1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Clcn2Q9R0A1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn2Q9R0A1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn2Q9R0A1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.36■□□□□ 0.69
Clcn2Q9R0A1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms