Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nubp1Q9R060 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nubp1Q9R060 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nubp1Q9R060 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nubp1Q9R060 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.56■□□□□ 0.24
Nubp1Q9R060 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.56■□□□□ 0.24
Nubp1Q9R060 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Nubp1Q9R060 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nubp1Q9R060 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nubp1Q9R060 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nubp1Q9R060 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nubp1Q9R060 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nubp1Q9R060 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nubp1Q9R060 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nubp1Q9R060 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nubp1Q9R060 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nubp1Q9R060 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.55■□□□□ 0.24
Nubp1Q9R060 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nubp1Q9R060 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nubp1Q9R060 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nubp1Q9R060 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nubp1Q9R060 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nubp1Q9R060 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.55■□□□□ 0.24
Nubp1Q9R060 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.55■□□□□ 0.24
Nubp1Q9R060 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.55■□□□□ 0.24
Nubp1Q9R060 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.55■□□□□ 0.24
Nubp1Q9R060 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nubp1Q9R060 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nubp1Q9R060 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Nubp1Q9R060 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Nubp1Q9R060 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nubp1Q9R060 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nubp1Q9R060 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Nubp1Q9R060 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nubp1Q9R060 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nubp1Q9R060 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nubp1Q9R060 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Nubp1Q9R060 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nubp1Q9R060 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.54■□□□□ 0.24
Nubp1Q9R060 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.54■□□□□ 0.24
Nubp1Q9R060 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.54■□□□□ 0.24
Nubp1Q9R060 Gm25007-201ENSMUST00000083808 133 ntBASIC16.54■□□□□ 0.24
Nubp1Q9R060 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.54■□□□□ 0.24
Nubp1Q9R060 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp1Q9R060 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp1Q9R060 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp1Q9R060 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp1Q9R060 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp1Q9R060 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp1Q9R060 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp1Q9R060 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp1Q9R060 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp1Q9R060 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp1Q9R060 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Nubp1Q9R060 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp1Q9R060 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Nubp1Q9R060 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp1Q9R060 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp1Q9R060 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp1Q9R060 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Nubp1Q9R060 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nubp1Q9R060 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nubp1Q9R060 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nubp1Q9R060 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nubp1Q9R060 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nubp1Q9R060 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nubp1Q9R060 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Nubp1Q9R060 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nubp1Q9R060 Gm11643-201ENSMUST00000119578 864 ntBASIC16.52■□□□□ 0.24
Nubp1Q9R060 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nubp1Q9R060 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nubp1Q9R060 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nubp1Q9R060 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nubp1Q9R060 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nubp1Q9R060 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nubp1Q9R060 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp1Q9R060 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Nubp1Q9R060 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp1Q9R060 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp1Q9R060 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp1Q9R060 Gm5643-201ENSMUST00000117081 966 ntBASIC16.51■□□□□ 0.23
Nubp1Q9R060 Gm38205-201ENSMUST00000192243 258 ntBASIC16.51■□□□□ 0.23
Nubp1Q9R060 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp1Q9R060 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Nubp1Q9R060 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp1Q9R060 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nubp1Q9R060 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Nubp1Q9R060 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp1Q9R060 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp1Q9R060 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.5■□□□□ 0.23
Nubp1Q9R060 Gm18558-201ENSMUST00000186253 1214 ntBASIC16.5■□□□□ 0.23
Nubp1Q9R060 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Nubp1Q9R060 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Nubp1Q9R060 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Nubp1Q9R060 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp1Q9R060 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Nubp1Q9R060 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp1Q9R060 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp1Q9R060 Iqck-206ENSMUST00000208658 2891 ntBASIC16.5■□□□□ 0.23
Nubp1Q9R060 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms