Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chaf1aQ9QWF0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chaf1aQ9QWF0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.22■□□□□ 0.99
Chaf1aQ9QWF0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chaf1aQ9QWF0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Chaf1aQ9QWF0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chaf1aQ9QWF0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chaf1aQ9QWF0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chaf1aQ9QWF0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.21■□□□□ 0.99
Chaf1aQ9QWF0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chaf1aQ9QWF0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.21■□□□□ 0.99
Chaf1aQ9QWF0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chaf1aQ9QWF0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chaf1aQ9QWF0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chaf1aQ9QWF0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chaf1aQ9QWF0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chaf1aQ9QWF0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chaf1aQ9QWF0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chaf1aQ9QWF0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Chaf1aQ9QWF0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chaf1aQ9QWF0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chaf1aQ9QWF0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chaf1aQ9QWF0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chaf1aQ9QWF0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chaf1aQ9QWF0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chaf1aQ9QWF0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chaf1aQ9QWF0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.2■□□□□ 0.98
Chaf1aQ9QWF0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chaf1aQ9QWF0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chaf1aQ9QWF0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Chaf1aQ9QWF0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chaf1aQ9QWF0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chaf1aQ9QWF0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chaf1aQ9QWF0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chaf1aQ9QWF0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Chaf1aQ9QWF0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chaf1aQ9QWF0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chaf1aQ9QWF0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.19■□□□□ 0.98
Chaf1aQ9QWF0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chaf1aQ9QWF0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.19■□□□□ 0.98
Chaf1aQ9QWF0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.19■□□□□ 0.98
Chaf1aQ9QWF0 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.19■□□□□ 0.98
Chaf1aQ9QWF0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Chaf1aQ9QWF0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chaf1aQ9QWF0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Chaf1aQ9QWF0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chaf1aQ9QWF0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chaf1aQ9QWF0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.18■□□□□ 0.98
Chaf1aQ9QWF0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Chaf1aQ9QWF0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Chaf1aQ9QWF0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chaf1aQ9QWF0 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.17■□□□□ 0.98
Chaf1aQ9QWF0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chaf1aQ9QWF0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chaf1aQ9QWF0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chaf1aQ9QWF0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chaf1aQ9QWF0 Serp2-204ENSMUST00000228055 705 ntBASIC21.17■□□□□ 0.98
Chaf1aQ9QWF0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chaf1aQ9QWF0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chaf1aQ9QWF0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chaf1aQ9QWF0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chaf1aQ9QWF0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chaf1aQ9QWF0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chaf1aQ9QWF0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chaf1aQ9QWF0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chaf1aQ9QWF0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chaf1aQ9QWF0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chaf1aQ9QWF0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chaf1aQ9QWF0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chaf1aQ9QWF0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Chaf1aQ9QWF0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.16■□□□□ 0.98
Chaf1aQ9QWF0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chaf1aQ9QWF0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chaf1aQ9QWF0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Chaf1aQ9QWF0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chaf1aQ9QWF0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Chaf1aQ9QWF0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chaf1aQ9QWF0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.15■□□□□ 0.98
Chaf1aQ9QWF0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chaf1aQ9QWF0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.15■□□□□ 0.98
Chaf1aQ9QWF0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Chaf1aQ9QWF0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chaf1aQ9QWF0 Gm9847-201ENSMUST00000052528 599 ntBASIC21.15■□□□□ 0.98
Chaf1aQ9QWF0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chaf1aQ9QWF0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chaf1aQ9QWF0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chaf1aQ9QWF0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Chaf1aQ9QWF0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Chaf1aQ9QWF0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.14■□□□□ 0.97
Chaf1aQ9QWF0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chaf1aQ9QWF0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.14■□□□□ 0.97
Chaf1aQ9QWF0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chaf1aQ9QWF0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chaf1aQ9QWF0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chaf1aQ9QWF0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Chaf1aQ9QWF0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Chaf1aQ9QWF0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chaf1aQ9QWF0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chaf1aQ9QWF0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Chaf1aQ9QWF0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms