Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Crlf1Q9JM58 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.33■□□□□ 0.05
Crlf1Q9JM58 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Crlf1Q9JM58 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Crlf1Q9JM58 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Crlf1Q9JM58 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
Crlf1Q9JM58 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Crlf1Q9JM58 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Crlf1Q9JM58 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crlf1Q9JM58 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Crlf1Q9JM58 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crlf1Q9JM58 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Crlf1Q9JM58 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.33■□□□□ 0.04
Crlf1Q9JM58 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crlf1Q9JM58 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crlf1Q9JM58 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crlf1Q9JM58 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crlf1Q9JM58 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Crlf1Q9JM58 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crlf1Q9JM58 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Crlf1Q9JM58 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Crlf1Q9JM58 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.32■□□□□ 0.04
Crlf1Q9JM58 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.32■□□□□ 0.04
Crlf1Q9JM58 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.32■□□□□ 0.04
Crlf1Q9JM58 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Crlf1Q9JM58 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.32■□□□□ 0.04
Crlf1Q9JM58 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Crlf1Q9JM58 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crlf1Q9JM58 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Crlf1Q9JM58 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crlf1Q9JM58 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crlf1Q9JM58 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Crlf1Q9JM58 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crlf1Q9JM58 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crlf1Q9JM58 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Crlf1Q9JM58 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Crlf1Q9JM58 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Mir5122-201ENSMUST00000175004 89 ntBASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Crlf1Q9JM58 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crlf1Q9JM58 Gm2399-201ENSMUST00000104944 225 ntBASIC15.3■□□□□ 0.04
Crlf1Q9JM58 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crlf1Q9JM58 Gm13158-201ENSMUST00000122007 736 ntBASIC15.3■□□□□ 0.04
Crlf1Q9JM58 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.3■□□□□ 0.04
Crlf1Q9JM58 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.3■□□□□ 0.04
Crlf1Q9JM58 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.3■□□□□ 0.04
Crlf1Q9JM58 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crlf1Q9JM58 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crlf1Q9JM58 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crlf1Q9JM58 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crlf1Q9JM58 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crlf1Q9JM58 Gm7367-201ENSMUST00000057611 492 ntBASIC15.3■□□□□ 0.04
Crlf1Q9JM58 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.3■□□□□ 0.04
Crlf1Q9JM58 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crlf1Q9JM58 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crlf1Q9JM58 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Crlf1Q9JM58 AA386476-201ENSMUST00000098781 1665 ntBASIC15.29■□□□□ 0.04
Crlf1Q9JM58 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crlf1Q9JM58 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Crlf1Q9JM58 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.29■□□□□ 0.04
Crlf1Q9JM58 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crlf1Q9JM58 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Crlf1Q9JM58 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Crlf1Q9JM58 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crlf1Q9JM58 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crlf1Q9JM58 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crlf1Q9JM58 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crlf1Q9JM58 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.28■□□□□ 0.04
Crlf1Q9JM58 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crlf1Q9JM58 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crlf1Q9JM58 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crlf1Q9JM58 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.28■□□□□ 0.04
Crlf1Q9JM58 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Crlf1Q9JM58 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Crlf1Q9JM58 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Crlf1Q9JM58 Gm5417-201ENSMUST00000079706 384 ntBASIC15.28■□□□□ 0.04
Crlf1Q9JM58 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crlf1Q9JM58 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crlf1Q9JM58 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.28■□□□□ 0.04
Crlf1Q9JM58 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Crlf1Q9JM58 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Crlf1Q9JM58 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Crlf1Q9JM58 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Crlf1Q9JM58 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Crlf1Q9JM58 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms