Protein–RNA interactions for Protein: Q9JJI8

Rpl38, 60S ribosomal protein L38, mousemouse

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl38Q9JJI8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl38Q9JJI8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rpl38Q9JJI8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.34■□□□□ 0.53
Rpl38Q9JJI8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Rpl38Q9JJI8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpl38Q9JJI8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpl38Q9JJI8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Rpl38Q9JJI8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rpl38Q9JJI8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpl38Q9JJI8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl38Q9JJI8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl38Q9JJI8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rpl38Q9JJI8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl38Q9JJI8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl38Q9JJI8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl38Q9JJI8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl38Q9JJI8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl38Q9JJI8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.33■□□□□ 0.52
Rpl38Q9JJI8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl38Q9JJI8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl38Q9JJI8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rpl38Q9JJI8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.32■□□□□ 0.52
Rpl38Q9JJI8 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.32■□□□□ 0.52
Rpl38Q9JJI8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.32■□□□□ 0.52
Rpl38Q9JJI8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.32■□□□□ 0.52
Rpl38Q9JJI8 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.32■□□□□ 0.52
Rpl38Q9JJI8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl38Q9JJI8 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.32■□□□□ 0.52
Rpl38Q9JJI8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl38Q9JJI8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl38Q9JJI8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rpl38Q9JJI8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl38Q9JJI8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl38Q9JJI8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Gm12251-201ENSMUST00000117893 792 ntBASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
Rpl38Q9JJI8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 BC021767-201ENSMUST00000126387 1716 ntBASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl38Q9JJI8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl38Q9JJI8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl38Q9JJI8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl38Q9JJI8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl38Q9JJI8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rpl38Q9JJI8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl38Q9JJI8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl38Q9JJI8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl38Q9JJI8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl38Q9JJI8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms