Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Gm9847-201ENSMUST00000052528 599 ntBASIC20.83■□□□□ 0.93
Copb1Q9JIF7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Copb1Q9JIF7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Copb1Q9JIF7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.82■□□□□ 0.92
Copb1Q9JIF7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Copb1Q9JIF7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Copb1Q9JIF7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Copb1Q9JIF7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Copb1Q9JIF7 Gm43137-201ENSMUST00000198052 594 ntBASIC20.82■□□□□ 0.92
Copb1Q9JIF7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Copb1Q9JIF7 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.82■□□□□ 0.92
Copb1Q9JIF7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Copb1Q9JIF7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
Copb1Q9JIF7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Copb1Q9JIF7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Copb1Q9JIF7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Copb1Q9JIF7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Copb1Q9JIF7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Copb1Q9JIF7 Gm12251-201ENSMUST00000117893 792 ntBASIC20.81■□□□□ 0.92
Copb1Q9JIF7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.81■□□□□ 0.92
Copb1Q9JIF7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.81■□□□□ 0.92
Copb1Q9JIF7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Copb1Q9JIF7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Copb1Q9JIF7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Copb1Q9JIF7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Copb1Q9JIF7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Copb1Q9JIF7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Copb1Q9JIF7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Copb1Q9JIF7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Copb1Q9JIF7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Copb1Q9JIF7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Copb1Q9JIF7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Copb1Q9JIF7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Copb1Q9JIF7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Copb1Q9JIF7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Copb1Q9JIF7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Copb1Q9JIF7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.79■□□□□ 0.92
Copb1Q9JIF7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Copb1Q9JIF7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Copb1Q9JIF7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Copb1Q9JIF7 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.79■□□□□ 0.92
Copb1Q9JIF7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Copb1Q9JIF7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Copb1Q9JIF7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Copb1Q9JIF7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Copb1Q9JIF7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Copb1Q9JIF7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Copb1Q9JIF7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Copb1Q9JIF7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Copb1Q9JIF7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Copb1Q9JIF7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Copb1Q9JIF7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Copb1Q9JIF7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Copb1Q9JIF7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Copb1Q9JIF7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Copb1Q9JIF7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.78■□□□□ 0.92
Copb1Q9JIF7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.78■□□□□ 0.92
Copb1Q9JIF7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Copb1Q9JIF7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Copb1Q9JIF7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Copb1Q9JIF7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Copb1Q9JIF7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Copb1Q9JIF7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Copb1Q9JIF7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Copb1Q9JIF7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Copb1Q9JIF7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Copb1Q9JIF7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.77■□□□□ 0.92
Copb1Q9JIF7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.77■□□□□ 0.92
Copb1Q9JIF7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Copb1Q9JIF7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Copb1Q9JIF7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Copb1Q9JIF7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Copb1Q9JIF7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.76■□□□□ 0.91
Copb1Q9JIF7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.76■□□□□ 0.91
Copb1Q9JIF7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Copb1Q9JIF7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Copb1Q9JIF7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Copb1Q9JIF7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Copb1Q9JIF7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Copb1Q9JIF7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Copb1Q9JIF7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Copb1Q9JIF7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Copb1Q9JIF7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms