Protein–RNA interactions for Protein: Q9ESX5

Dkc1, H/ACA ribonucleoprotein complex subunit 4, mousemouse

Known RBP Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkc1Q9ESX5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Dkc1Q9ESX5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Dkc1Q9ESX5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Dkc1Q9ESX5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Dkc1Q9ESX5 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.25■□□□□ 0.83
Dkc1Q9ESX5 Gm10493-201ENSMUST00000097270 612 ntBASIC20.25■□□□□ 0.83
Dkc1Q9ESX5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Dkc1Q9ESX5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Dkc1Q9ESX5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Dkc1Q9ESX5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.24■□□□□ 0.83
Dkc1Q9ESX5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dkc1Q9ESX5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.24■□□□□ 0.83
Dkc1Q9ESX5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dkc1Q9ESX5 Gm9988-201ENSMUST00000069786 435 ntBASIC20.24■□□□□ 0.83
Dkc1Q9ESX5 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dkc1Q9ESX5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dkc1Q9ESX5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.24■□□□□ 0.83
Dkc1Q9ESX5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dkc1Q9ESX5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dkc1Q9ESX5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Dkc1Q9ESX5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dkc1Q9ESX5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Dkc1Q9ESX5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dkc1Q9ESX5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dkc1Q9ESX5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dkc1Q9ESX5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Dkc1Q9ESX5 Gm38205-201ENSMUST00000192243 258 ntBASIC20.23■□□□□ 0.83
Dkc1Q9ESX5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dkc1Q9ESX5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dkc1Q9ESX5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dkc1Q9ESX5 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.23■□□□□ 0.83
Dkc1Q9ESX5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dkc1Q9ESX5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.23■□□□□ 0.83
Dkc1Q9ESX5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dkc1Q9ESX5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dkc1Q9ESX5 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.22■□□□□ 0.83
Dkc1Q9ESX5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dkc1Q9ESX5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Dkc1Q9ESX5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dkc1Q9ESX5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dkc1Q9ESX5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.22■□□□□ 0.83
Dkc1Q9ESX5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.22■□□□□ 0.83
Dkc1Q9ESX5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Dkc1Q9ESX5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dkc1Q9ESX5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Dkc1Q9ESX5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dkc1Q9ESX5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Dkc1Q9ESX5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Dkc1Q9ESX5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dkc1Q9ESX5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dkc1Q9ESX5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.21■□□□□ 0.83
Dkc1Q9ESX5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.21■□□□□ 0.83
Dkc1Q9ESX5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Dkc1Q9ESX5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Dkc1Q9ESX5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dkc1Q9ESX5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dkc1Q9ESX5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dkc1Q9ESX5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Dkc1Q9ESX5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dkc1Q9ESX5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.21■□□□□ 0.83
Dkc1Q9ESX5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dkc1Q9ESX5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dkc1Q9ESX5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dkc1Q9ESX5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.2■□□□□ 0.82
Dkc1Q9ESX5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dkc1Q9ESX5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dkc1Q9ESX5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dkc1Q9ESX5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dkc1Q9ESX5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Dkc1Q9ESX5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dkc1Q9ESX5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Dkc1Q9ESX5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Dkc1Q9ESX5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dkc1Q9ESX5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dkc1Q9ESX5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Dkc1Q9ESX5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dkc1Q9ESX5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.19■□□□□ 0.82
Dkc1Q9ESX5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Gm13146-201ENSMUST00000118508 780 ntBASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Reep4-203ENSMUST00000226563 1444 ntBASIC20.18■□□□□ 0.82
Dkc1Q9ESX5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Dkc1Q9ESX5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dkc1Q9ESX5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms