Protein–RNA interactions for Protein: Q9EQR4

Clca3a2, Chloride channel accessory 3A2, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a2Q9EQR4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clca3a2Q9EQR4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clca3a2Q9EQR4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clca3a2Q9EQR4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clca3a2Q9EQR4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clca3a2Q9EQR4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clca3a2Q9EQR4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clca3a2Q9EQR4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clca3a2Q9EQR4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clca3a2Q9EQR4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clca3a2Q9EQR4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.19■□□□□ 0.5
Clca3a2Q9EQR4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clca3a2Q9EQR4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.19■□□□□ 0.5
Clca3a2Q9EQR4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clca3a2Q9EQR4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Clca3a2Q9EQR4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clca3a2Q9EQR4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clca3a2Q9EQR4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clca3a2Q9EQR4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clca3a2Q9EQR4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca3a2Q9EQR4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca3a2Q9EQR4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Gm38205-201ENSMUST00000192243 258 ntBASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clca3a2Q9EQR4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clca3a2Q9EQR4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clca3a2Q9EQR4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clca3a2Q9EQR4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clca3a2Q9EQR4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Clca3a2Q9EQR4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clca3a2Q9EQR4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clca3a2Q9EQR4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.15■□□□□ 0.5
Clca3a2Q9EQR4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.15■□□□□ 0.5
Clca3a2Q9EQR4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clca3a2Q9EQR4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Clca3a2Q9EQR4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clca3a2Q9EQR4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clca3a2Q9EQR4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clca3a2Q9EQR4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clca3a2Q9EQR4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Clca3a2Q9EQR4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clca3a2Q9EQR4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Clca3a2Q9EQR4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clca3a2Q9EQR4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clca3a2Q9EQR4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clca3a2Q9EQR4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms