Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col4a3bpQ9EQG9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col4a3bpQ9EQG9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col4a3bpQ9EQG9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Col4a3bpQ9EQG9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.09
Col4a3bpQ9EQG9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col4a3bpQ9EQG9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col4a3bpQ9EQG9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col4a3bpQ9EQG9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col4a3bpQ9EQG9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col4a3bpQ9EQG9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col4a3bpQ9EQG9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 Gm26833-201ENSMUST00000180899 440 ntBASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a3bpQ9EQG9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a3bpQ9EQG9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a3bpQ9EQG9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a3bpQ9EQG9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.81■■□□□ 1.08
Col4a3bpQ9EQG9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a3bpQ9EQG9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a3bpQ9EQG9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a3bpQ9EQG9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a3bpQ9EQG9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Col4a3bpQ9EQG9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a3bpQ9EQG9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a3bpQ9EQG9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a3bpQ9EQG9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a3bpQ9EQG9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a3bpQ9EQG9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.8■■□□□ 1.08
Col4a3bpQ9EQG9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a3bpQ9EQG9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Col4a3bpQ9EQG9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a3bpQ9EQG9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.8■■□□□ 1.08
Col4a3bpQ9EQG9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a3bpQ9EQG9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a3bpQ9EQG9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a3bpQ9EQG9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a3bpQ9EQG9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a3bpQ9EQG9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a3bpQ9EQG9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.79■■□□□ 1.08
Col4a3bpQ9EQG9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a3bpQ9EQG9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Col4a3bpQ9EQG9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Col4a3bpQ9EQG9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Col4a3bpQ9EQG9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a3bpQ9EQG9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a3bpQ9EQG9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a3bpQ9EQG9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a3bpQ9EQG9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a3bpQ9EQG9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a3bpQ9EQG9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a3bpQ9EQG9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.78■■□□□ 1.08
Col4a3bpQ9EQG9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a3bpQ9EQG9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.78■■□□□ 1.08
Col4a3bpQ9EQG9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Col4a3bpQ9EQG9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a3bpQ9EQG9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a3bpQ9EQG9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a3bpQ9EQG9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a3bpQ9EQG9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Col4a3bpQ9EQG9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Col4a3bpQ9EQG9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a3bpQ9EQG9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a3bpQ9EQG9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a3bpQ9EQG9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a3bpQ9EQG9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a3bpQ9EQG9 Smad6-203ENSMUST00000179458 273 ntBASIC21.77■■□□□ 1.08
Col4a3bpQ9EQG9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Col4a3bpQ9EQG9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a3bpQ9EQG9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a3bpQ9EQG9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.77■■□□□ 1.08
Col4a3bpQ9EQG9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Col4a3bpQ9EQG9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a3bpQ9EQG9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a3bpQ9EQG9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a3bpQ9EQG9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.76■■□□□ 1.07
Col4a3bpQ9EQG9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a3bpQ9EQG9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a3bpQ9EQG9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a3bpQ9EQG9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.75■■□□□ 1.07
Col4a3bpQ9EQG9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.75■■□□□ 1.07
Col4a3bpQ9EQG9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Col4a3bpQ9EQG9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Col4a3bpQ9EQG9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.75■■□□□ 1.07
Col4a3bpQ9EQG9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.75■■□□□ 1.07
Col4a3bpQ9EQG9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms