Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nif3l1Q9EQ80 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nif3l1Q9EQ80 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
Nif3l1Q9EQ80 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.89■□□□□ 0.61
Nif3l1Q9EQ80 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nif3l1Q9EQ80 Gm9988-201ENSMUST00000069786 435 ntBASIC18.89■□□□□ 0.61
Nif3l1Q9EQ80 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nif3l1Q9EQ80 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Nif3l1Q9EQ80 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nif3l1Q9EQ80 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nif3l1Q9EQ80 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nif3l1Q9EQ80 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nif3l1Q9EQ80 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nif3l1Q9EQ80 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nif3l1Q9EQ80 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nif3l1Q9EQ80 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Nif3l1Q9EQ80 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nif3l1Q9EQ80 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Nif3l1Q9EQ80 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.88■□□□□ 0.61
Nif3l1Q9EQ80 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nif3l1Q9EQ80 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Nif3l1Q9EQ80 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.88■□□□□ 0.61
Nif3l1Q9EQ80 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.88■□□□□ 0.61
Nif3l1Q9EQ80 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Nif3l1Q9EQ80 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Nif3l1Q9EQ80 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.87■□□□□ 0.61
Nif3l1Q9EQ80 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nif3l1Q9EQ80 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nif3l1Q9EQ80 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nif3l1Q9EQ80 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nif3l1Q9EQ80 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nif3l1Q9EQ80 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nif3l1Q9EQ80 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.86■□□□□ 0.61
Nif3l1Q9EQ80 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.86■□□□□ 0.61
Nif3l1Q9EQ80 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nif3l1Q9EQ80 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.86■□□□□ 0.61
Nif3l1Q9EQ80 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.86■□□□□ 0.61
Nif3l1Q9EQ80 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nif3l1Q9EQ80 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Nif3l1Q9EQ80 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nif3l1Q9EQ80 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nif3l1Q9EQ80 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nif3l1Q9EQ80 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nif3l1Q9EQ80 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.85■□□□□ 0.61
Nif3l1Q9EQ80 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.85■□□□□ 0.61
Nif3l1Q9EQ80 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nif3l1Q9EQ80 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.85■□□□□ 0.61
Nif3l1Q9EQ80 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.85■□□□□ 0.61
Nif3l1Q9EQ80 Gm38205-201ENSMUST00000192243 258 ntBASIC18.85■□□□□ 0.61
Nif3l1Q9EQ80 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.85■□□□□ 0.61
Nif3l1Q9EQ80 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.85■□□□□ 0.61
Nif3l1Q9EQ80 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.85■□□□□ 0.61
Nif3l1Q9EQ80 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nif3l1Q9EQ80 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nif3l1Q9EQ80 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nif3l1Q9EQ80 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nif3l1Q9EQ80 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nif3l1Q9EQ80 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nif3l1Q9EQ80 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Nif3l1Q9EQ80 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nif3l1Q9EQ80 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nif3l1Q9EQ80 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nif3l1Q9EQ80 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nif3l1Q9EQ80 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nif3l1Q9EQ80 Gm10493-201ENSMUST00000097270 612 ntBASIC18.84■□□□□ 0.61
Nif3l1Q9EQ80 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nif3l1Q9EQ80 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nif3l1Q9EQ80 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nif3l1Q9EQ80 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nif3l1Q9EQ80 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nif3l1Q9EQ80 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nif3l1Q9EQ80 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nif3l1Q9EQ80 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nif3l1Q9EQ80 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.83■□□□□ 0.61
Nif3l1Q9EQ80 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
Nif3l1Q9EQ80 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nif3l1Q9EQ80 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nif3l1Q9EQ80 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nif3l1Q9EQ80 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms