Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpne8Q9DC53 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cpne8Q9DC53 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpne8Q9DC53 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpne8Q9DC53 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpne8Q9DC53 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpne8Q9DC53 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpne8Q9DC53 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpne8Q9DC53 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpne8Q9DC53 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpne8Q9DC53 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpne8Q9DC53 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpne8Q9DC53 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cpne8Q9DC53 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Cpne8Q9DC53 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpne8Q9DC53 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Cpne8Q9DC53 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpne8Q9DC53 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Cpne8Q9DC53 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpne8Q9DC53 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpne8Q9DC53 Gm40848-201ENSMUST00000221998 324 ntBASIC19.89■□□□□ 0.77
Cpne8Q9DC53 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Cpne8Q9DC53 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne8Q9DC53 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpne8Q9DC53 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cpne8Q9DC53 Gm12821-201ENSMUST00000120022 600 ntBASIC19.87■□□□□ 0.77
Cpne8Q9DC53 Gm11421-201ENSMUST00000122124 294 ntBASIC19.87■□□□□ 0.77
Cpne8Q9DC53 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cpne8Q9DC53 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpne8Q9DC53 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cpne8Q9DC53 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpne8Q9DC53 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpne8Q9DC53 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cpne8Q9DC53 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpne8Q9DC53 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpne8Q9DC53 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.86■□□□□ 0.77
Cpne8Q9DC53 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpne8Q9DC53 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpne8Q9DC53 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cpne8Q9DC53 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpne8Q9DC53 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Cpne8Q9DC53 Gm43017-201ENSMUST00000198296 752 ntBASIC19.86■□□□□ 0.77
Cpne8Q9DC53 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpne8Q9DC53 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cpne8Q9DC53 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Cpne8Q9DC53 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne8Q9DC53 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne8Q9DC53 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne8Q9DC53 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne8Q9DC53 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne8Q9DC53 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne8Q9DC53 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne8Q9DC53 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.85■□□□□ 0.77
Cpne8Q9DC53 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne8Q9DC53 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne8Q9DC53 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne8Q9DC53 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne8Q9DC53 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne8Q9DC53 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne8Q9DC53 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.84■□□□□ 0.77
Cpne8Q9DC53 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne8Q9DC53 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne8Q9DC53 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cpne8Q9DC53 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne8Q9DC53 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne8Q9DC53 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpne8Q9DC53 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpne8Q9DC53 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cpne8Q9DC53 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cpne8Q9DC53 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cpne8Q9DC53 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cpne8Q9DC53 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Cpne8Q9DC53 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cpne8Q9DC53 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.83■□□□□ 0.76
Cpne8Q9DC53 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.76
Cpne8Q9DC53 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Cpne8Q9DC53 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpne8Q9DC53 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpne8Q9DC53 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cpne8Q9DC53 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cpne8Q9DC53 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms