Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hmg20aQ9DC33 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hmg20aQ9DC33 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmg20aQ9DC33 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Hmg20aQ9DC33 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmg20aQ9DC33 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmg20aQ9DC33 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Hmg20aQ9DC33 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.41■□□□□ 0.38
Hmg20aQ9DC33 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.41■□□□□ 0.38
Hmg20aQ9DC33 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.41■□□□□ 0.38
Hmg20aQ9DC33 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hmg20aQ9DC33 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.41■□□□□ 0.38
Hmg20aQ9DC33 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmg20aQ9DC33 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmg20aQ9DC33 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmg20aQ9DC33 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmg20aQ9DC33 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.4■□□□□ 0.38
Hmg20aQ9DC33 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.39■□□□□ 0.38
Hmg20aQ9DC33 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmg20aQ9DC33 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hmg20aQ9DC33 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmg20aQ9DC33 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Fst-202ENSMUST00000223640 2612 ntBASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmg20aQ9DC33 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20aQ9DC33 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20aQ9DC33 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20aQ9DC33 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Hmg20aQ9DC33 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Hmg20aQ9DC33 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.37■□□□□ 0.37
Hmg20aQ9DC33 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.37■□□□□ 0.37
Hmg20aQ9DC33 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20aQ9DC33 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Hmg20aQ9DC33 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20aQ9DC33 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20aQ9DC33 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmg20aQ9DC33 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.36■□□□□ 0.37
Hmg20aQ9DC33 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20aQ9DC33 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.36■□□□□ 0.37
Hmg20aQ9DC33 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.36■□□□□ 0.37
Hmg20aQ9DC33 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20aQ9DC33 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.36■□□□□ 0.37
Hmg20aQ9DC33 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Hmg20aQ9DC33 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hmg20aQ9DC33 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.36■□□□□ 0.37
Hmg20aQ9DC33 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Hmg20aQ9DC33 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20aQ9DC33 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20aQ9DC33 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmg20aQ9DC33 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20aQ9DC33 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20aQ9DC33 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20aQ9DC33 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20aQ9DC33 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20aQ9DC33 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20aQ9DC33 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20aQ9DC33 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Hmg20aQ9DC33 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.35■□□□□ 0.37
Hmg20aQ9DC33 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hmg20aQ9DC33 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.35■□□□□ 0.37
Hmg20aQ9DC33 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmg20aQ9DC33 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms