Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Gtf3c6Q9D8P7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Gtf3c6Q9D8P7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf3c6Q9D8P7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf3c6Q9D8P7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf3c6Q9D8P7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf3c6Q9D8P7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Gtf3c6Q9D8P7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf3c6Q9D8P7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf3c6Q9D8P7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf3c6Q9D8P7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.29■□□□□ 0.84
Gtf3c6Q9D8P7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf3c6Q9D8P7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf3c6Q9D8P7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Gtf3c6Q9D8P7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf3c6Q9D8P7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Gtf3c6Q9D8P7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf3c6Q9D8P7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 Haglr-201ENSMUST00000100000 2085 ntBASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf3c6Q9D8P7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Gm7860-201ENSMUST00000121190 879 ntBASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf3c6Q9D8P7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf3c6Q9D8P7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Gtf3c6Q9D8P7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf3c6Q9D8P7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf3c6Q9D8P7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Gtf3c6Q9D8P7 Gm40848-201ENSMUST00000221998 324 ntBASIC20.26■□□□□ 0.83
Gtf3c6Q9D8P7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf3c6Q9D8P7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf3c6Q9D8P7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf3c6Q9D8P7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf3c6Q9D8P7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf3c6Q9D8P7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Gtf3c6Q9D8P7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf3c6Q9D8P7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gtf3c6Q9D8P7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gtf3c6Q9D8P7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Gtf3c6Q9D8P7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gtf3c6Q9D8P7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gtf3c6Q9D8P7 BC021767-201ENSMUST00000126387 1716 ntBASIC20.25■□□□□ 0.83
Gtf3c6Q9D8P7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Gtf3c6Q9D8P7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.25■□□□□ 0.83
Gtf3c6Q9D8P7 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.25■□□□□ 0.83
Gtf3c6Q9D8P7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gtf3c6Q9D8P7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gtf3c6Q9D8P7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gtf3c6Q9D8P7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gtf3c6Q9D8P7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Gtf3c6Q9D8P7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gtf3c6Q9D8P7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.24■□□□□ 0.83
Gtf3c6Q9D8P7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gtf3c6Q9D8P7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gtf3c6Q9D8P7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gtf3c6Q9D8P7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gtf3c6Q9D8P7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.24■□□□□ 0.83
Gtf3c6Q9D8P7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Gtf3c6Q9D8P7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gtf3c6Q9D8P7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gtf3c6Q9D8P7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Gtf3c6Q9D8P7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.24■□□□□ 0.83
Gtf3c6Q9D8P7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gtf3c6Q9D8P7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gtf3c6Q9D8P7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Gtf3c6Q9D8P7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Gtf3c6Q9D8P7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gtf3c6Q9D8P7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Gtf3c6Q9D8P7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms