Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm3375-201ENSMUST00000203929 796 ntBASIC20.67■□□□□ 0.9
Lysmd1Q9D0E3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.67■□□□□ 0.9
Lysmd1Q9D0E3 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.67■□□□□ 0.9
Lysmd1Q9D0E3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lysmd1Q9D0E3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lysmd1Q9D0E3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lysmd1Q9D0E3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.66■□□□□ 0.9
Lysmd1Q9D0E3 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.66■□□□□ 0.9
Lysmd1Q9D0E3 Mzt1-203ENSMUST00000227948 952 ntBASIC20.66■□□□□ 0.9
Lysmd1Q9D0E3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd1Q9D0E3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd1Q9D0E3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd1Q9D0E3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd1Q9D0E3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd1Q9D0E3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd1Q9D0E3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd1Q9D0E3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd1Q9D0E3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd1Q9D0E3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.65■□□□□ 0.9
Lysmd1Q9D0E3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Lysmd1Q9D0E3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd1Q9D0E3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Lysmd1Q9D0E3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lysmd1Q9D0E3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Lysmd1Q9D0E3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.64■□□□□ 0.89
Lysmd1Q9D0E3 Timm23-208ENSMUST00000226683 750 ntBASIC20.64■□□□□ 0.89
Lysmd1Q9D0E3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lysmd1Q9D0E3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Lysmd1Q9D0E3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lysmd1Q9D0E3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.64■□□□□ 0.89
Lysmd1Q9D0E3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd1Q9D0E3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd1Q9D0E3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd1Q9D0E3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd1Q9D0E3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd1Q9D0E3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd1Q9D0E3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd1Q9D0E3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd1Q9D0E3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd1Q9D0E3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd1Q9D0E3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd1Q9D0E3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd1Q9D0E3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Lysmd1Q9D0E3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Lysmd1Q9D0E3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd1Q9D0E3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd1Q9D0E3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.61■□□□□ 0.89
Lysmd1Q9D0E3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.61■□□□□ 0.89
Lysmd1Q9D0E3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd1Q9D0E3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd1Q9D0E3 Gm45058-201ENSMUST00000205810 766 ntBASIC20.61■□□□□ 0.89
Lysmd1Q9D0E3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd1Q9D0E3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd1Q9D0E3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd1Q9D0E3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd1Q9D0E3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.6■□□□□ 0.89
Lysmd1Q9D0E3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd1Q9D0E3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd1Q9D0E3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd1Q9D0E3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd1Q9D0E3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd1Q9D0E3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd1Q9D0E3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Lysmd1Q9D0E3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd1Q9D0E3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd1Q9D0E3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Lysmd1Q9D0E3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Lysmd1Q9D0E3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
Lysmd1Q9D0E3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Lysmd1Q9D0E3 Gm25016-201ENSMUST00000158399 131 ntBASIC20.58■□□□□ 0.89
Lysmd1Q9D0E3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd1Q9D0E3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd1Q9D0E3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd1Q9D0E3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd1Q9D0E3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Lysmd1Q9D0E3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lysmd1Q9D0E3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd1Q9D0E3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd1Q9D0E3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd1Q9D0E3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC20.57■□□□□ 0.88
Lysmd1Q9D0E3 Gm17807-201ENSMUST00000186869 298 ntBASIC20.57■□□□□ 0.88
Lysmd1Q9D0E3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd1Q9D0E3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd1Q9D0E3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Lysmd1Q9D0E3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Lysmd1Q9D0E3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd1Q9D0E3 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.57■□□□□ 0.88
Lysmd1Q9D0E3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd1Q9D0E3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd1Q9D0E3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd1Q9D0E3 Gm11927-201ENSMUST00000118472 759 ntBASIC20.56■□□□□ 0.88
Lysmd1Q9D0E3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd1Q9D0E3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd1Q9D0E3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd1Q9D0E3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd1Q9D0E3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd1Q9D0E3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd1Q9D0E3 Gm27704-201ENSMUST00000185094 107 ntBASIC20.55■□□□□ 0.88
Lysmd1Q9D0E3 Gm42545-201ENSMUST00000202755 922 ntBASIC20.55■□□□□ 0.88
Lysmd1Q9D0E3 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms