Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trem2Q99NH8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trem2Q99NH8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trem2Q99NH8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trem2Q99NH8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trem2Q99NH8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trem2Q99NH8 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.44■□□□□ 0.7
Trem2Q99NH8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trem2Q99NH8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trem2Q99NH8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trem2Q99NH8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trem2Q99NH8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trem2Q99NH8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trem2Q99NH8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Trem2Q99NH8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trem2Q99NH8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trem2Q99NH8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trem2Q99NH8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trem2Q99NH8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trem2Q99NH8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trem2Q99NH8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trem2Q99NH8 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.43■□□□□ 0.7
Trem2Q99NH8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trem2Q99NH8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trem2Q99NH8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trem2Q99NH8 Gm43017-201ENSMUST00000198296 752 ntBASIC19.43■□□□□ 0.7
Trem2Q99NH8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trem2Q99NH8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trem2Q99NH8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trem2Q99NH8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trem2Q99NH8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trem2Q99NH8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trem2Q99NH8 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.43■□□□□ 0.7
Trem2Q99NH8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trem2Q99NH8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trem2Q99NH8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trem2Q99NH8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trem2Q99NH8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trem2Q99NH8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trem2Q99NH8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trem2Q99NH8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trem2Q99NH8 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.42■□□□□ 0.7
Trem2Q99NH8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Trem2Q99NH8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trem2Q99NH8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trem2Q99NH8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trem2Q99NH8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trem2Q99NH8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trem2Q99NH8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trem2Q99NH8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trem2Q99NH8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trem2Q99NH8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trem2Q99NH8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Trem2Q99NH8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trem2Q99NH8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trem2Q99NH8 Gm40848-201ENSMUST00000221998 324 ntBASIC19.41■□□□□ 0.7
Trem2Q99NH8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trem2Q99NH8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trem2Q99NH8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trem2Q99NH8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trem2Q99NH8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trem2Q99NH8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trem2Q99NH8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trem2Q99NH8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trem2Q99NH8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.41■□□□□ 0.7
Trem2Q99NH8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trem2Q99NH8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trem2Q99NH8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.4■□□□□ 0.7
Trem2Q99NH8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trem2Q99NH8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Trem2Q99NH8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trem2Q99NH8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trem2Q99NH8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.39■□□□□ 0.69
Trem2Q99NH8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trem2Q99NH8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trem2Q99NH8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trem2Q99NH8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.39■□□□□ 0.69
Trem2Q99NH8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trem2Q99NH8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trem2Q99NH8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trem2Q99NH8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trem2Q99NH8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trem2Q99NH8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trem2Q99NH8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms