Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Col25a1Q99MQ5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.79■□□□□ 0.76
Col25a1Q99MQ5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Col25a1Q99MQ5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col25a1Q99MQ5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Col25a1Q99MQ5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col25a1Q99MQ5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col25a1Q99MQ5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col25a1Q99MQ5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col25a1Q99MQ5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col25a1Q99MQ5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col25a1Q99MQ5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Mir5122-201ENSMUST00000175004 89 ntBASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col25a1Q99MQ5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Gm18666-201ENSMUST00000190039 958 ntBASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Gm2559-201ENSMUST00000201323 363 ntBASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col25a1Q99MQ5 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.76■□□□□ 0.75
Col25a1Q99MQ5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col25a1Q99MQ5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col25a1Q99MQ5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Col25a1Q99MQ5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col25a1Q99MQ5 Gm15378-201ENSMUST00000121894 207 ntBASIC19.76■□□□□ 0.75
Col25a1Q99MQ5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Col25a1Q99MQ5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.76■□□□□ 0.75
Col25a1Q99MQ5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.76■□□□□ 0.75
Col25a1Q99MQ5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col25a1Q99MQ5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col25a1Q99MQ5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col25a1Q99MQ5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.76■□□□□ 0.75
Col25a1Q99MQ5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col25a1Q99MQ5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col25a1Q99MQ5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.75■□□□□ 0.75
Col25a1Q99MQ5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.75■□□□□ 0.75
Col25a1Q99MQ5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col25a1Q99MQ5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col25a1Q99MQ5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col25a1Q99MQ5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col25a1Q99MQ5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col25a1Q99MQ5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col25a1Q99MQ5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Col25a1Q99MQ5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col25a1Q99MQ5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col25a1Q99MQ5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col25a1Q99MQ5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col25a1Q99MQ5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.74■□□□□ 0.75
Col25a1Q99MQ5 Gm44771-201ENSMUST00000206975 626 ntBASIC19.74■□□□□ 0.75
Col25a1Q99MQ5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.74■□□□□ 0.75
Col25a1Q99MQ5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col25a1Q99MQ5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col25a1Q99MQ5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col25a1Q99MQ5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Col25a1Q99MQ5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.73■□□□□ 0.75
Col25a1Q99MQ5 Gm13534-201ENSMUST00000121169 513 ntBASIC19.73■□□□□ 0.75
Col25a1Q99MQ5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.73■□□□□ 0.75
Col25a1Q99MQ5 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col25a1Q99MQ5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col25a1Q99MQ5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col25a1Q99MQ5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col25a1Q99MQ5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col25a1Q99MQ5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col25a1Q99MQ5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col25a1Q99MQ5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col25a1Q99MQ5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col25a1Q99MQ5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms