Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.94■□□□□ 0.46
Nkd1Q99MH6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.94■□□□□ 0.46
Nkd1Q99MH6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkd1Q99MH6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkd1Q99MH6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.94■□□□□ 0.46
Nkd1Q99MH6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkd1Q99MH6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkd1Q99MH6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Nkd1Q99MH6 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.94■□□□□ 0.46
Nkd1Q99MH6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkd1Q99MH6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkd1Q99MH6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkd1Q99MH6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd1Q99MH6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.93■□□□□ 0.46
Nkd1Q99MH6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nkd1Q99MH6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd1Q99MH6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.93■□□□□ 0.46
Nkd1Q99MH6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd1Q99MH6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd1Q99MH6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd1Q99MH6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nkd1Q99MH6 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.93■□□□□ 0.46
Nkd1Q99MH6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd1Q99MH6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd1Q99MH6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd1Q99MH6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd1Q99MH6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Nkd1Q99MH6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nkd1Q99MH6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkd1Q99MH6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkd1Q99MH6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkd1Q99MH6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nkd1Q99MH6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nkd1Q99MH6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkd1Q99MH6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Nkd1Q99MH6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nkd1Q99MH6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.92■□□□□ 0.46
Nkd1Q99MH6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.92■□□□□ 0.46
Nkd1Q99MH6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.92■□□□□ 0.46
Nkd1Q99MH6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkd1Q99MH6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkd1Q99MH6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nkd1Q99MH6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
Nkd1Q99MH6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkd1Q99MH6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkd1Q99MH6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkd1Q99MH6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkd1Q99MH6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkd1Q99MH6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkd1Q99MH6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkd1Q99MH6 Gm12922-201ENSMUST00000120626 809 ntBASIC17.91■□□□□ 0.46
Nkd1Q99MH6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.91■□□□□ 0.46
Nkd1Q99MH6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.91■□□□□ 0.46
Nkd1Q99MH6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.91■□□□□ 0.46
Nkd1Q99MH6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkd1Q99MH6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkd1Q99MH6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Nkd1Q99MH6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkd1Q99MH6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.91■□□□□ 0.46
Nkd1Q99MH6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Nkd1Q99MH6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkd1Q99MH6 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.9■□□□□ 0.46
Nkd1Q99MH6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkd1Q99MH6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkd1Q99MH6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkd1Q99MH6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkd1Q99MH6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkd1Q99MH6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkd1Q99MH6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkd1Q99MH6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nkd1Q99MH6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkd1Q99MH6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkd1Q99MH6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkd1Q99MH6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkd1Q99MH6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nkd1Q99MH6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
Nkd1Q99MH6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nkd1Q99MH6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nkd1Q99MH6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nkd1Q99MH6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkd1Q99MH6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkd1Q99MH6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkd1Q99MH6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.89■□□□□ 0.45
Nkd1Q99MH6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkd1Q99MH6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.89■□□□□ 0.45
Nkd1Q99MH6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.89■□□□□ 0.45
Nkd1Q99MH6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.89■□□□□ 0.45
Nkd1Q99MH6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkd1Q99MH6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkd1Q99MH6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkd1Q99MH6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Nkd1Q99MH6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkd1Q99MH6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkd1Q99MH6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkd1Q99MH6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkd1Q99MH6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkd1Q99MH6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkd1Q99MH6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkd1Q99MH6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkd1Q99MH6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms