Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdca3Q99M54 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cdca3Q99M54 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.6■□□□□ 0.41
Cdca3Q99M54 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdca3Q99M54 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdca3Q99M54 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdca3Q99M54 Gm11421-201ENSMUST00000122124 294 ntBASIC17.6■□□□□ 0.41
Cdca3Q99M54 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdca3Q99M54 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdca3Q99M54 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.6■□□□□ 0.41
Cdca3Q99M54 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.6■□□□□ 0.41
Cdca3Q99M54 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.6■□□□□ 0.41
Cdca3Q99M54 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdca3Q99M54 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdca3Q99M54 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.6■□□□□ 0.41
Cdca3Q99M54 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Cdca3Q99M54 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdca3Q99M54 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdca3Q99M54 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdca3Q99M54 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdca3Q99M54 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdca3Q99M54 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdca3Q99M54 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cdca3Q99M54 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.59■□□□□ 0.41
Cdca3Q99M54 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdca3Q99M54 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdca3Q99M54 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdca3Q99M54 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdca3Q99M54 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdca3Q99M54 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdca3Q99M54 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdca3Q99M54 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdca3Q99M54 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdca3Q99M54 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdca3Q99M54 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdca3Q99M54 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdca3Q99M54 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdca3Q99M54 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cdca3Q99M54 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdca3Q99M54 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdca3Q99M54 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.58■□□□□ 0.4
Cdca3Q99M54 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdca3Q99M54 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdca3Q99M54 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdca3Q99M54 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdca3Q99M54 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cdca3Q99M54 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.57■□□□□ 0.4
Cdca3Q99M54 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdca3Q99M54 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdca3Q99M54 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdca3Q99M54 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdca3Q99M54 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.57■□□□□ 0.4
Cdca3Q99M54 Gm9988-201ENSMUST00000069786 435 ntBASIC17.57■□□□□ 0.4
Cdca3Q99M54 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdca3Q99M54 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdca3Q99M54 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdca3Q99M54 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdca3Q99M54 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdca3Q99M54 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdca3Q99M54 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdca3Q99M54 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdca3Q99M54 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdca3Q99M54 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdca3Q99M54 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Cdca3Q99M54 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdca3Q99M54 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdca3Q99M54 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdca3Q99M54 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdca3Q99M54 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdca3Q99M54 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdca3Q99M54 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdca3Q99M54 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.56■□□□□ 0.4
Cdca3Q99M54 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdca3Q99M54 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.56■□□□□ 0.4
Cdca3Q99M54 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdca3Q99M54 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdca3Q99M54 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdca3Q99M54 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdca3Q99M54 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdca3Q99M54 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cdca3Q99M54 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdca3Q99M54 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdca3Q99M54 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdca3Q99M54 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdca3Q99M54 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.55■□□□□ 0.4
Cdca3Q99M54 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdca3Q99M54 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdca3Q99M54 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdca3Q99M54 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdca3Q99M54 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.55■□□□□ 0.4
Cdca3Q99M54 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdca3Q99M54 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Cdca3Q99M54 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdca3Q99M54 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cdca3Q99M54 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdca3Q99M54 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.54■□□□□ 0.4
Cdca3Q99M54 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdca3Q99M54 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdca3Q99M54 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.54■□□□□ 0.4
Cdca3Q99M54 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms