Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lysmd3Q99LE3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lysmd3Q99LE3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Lysmd3Q99LE3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Lysmd3Q99LE3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lysmd3Q99LE3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lysmd3Q99LE3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lysmd3Q99LE3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Lysmd3Q99LE3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Lysmd3Q99LE3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Lysmd3Q99LE3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Lysmd3Q99LE3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Lysmd3Q99LE3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lysmd3Q99LE3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Lysmd3Q99LE3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lysmd3Q99LE3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.76■□□□□ 0.75
Lysmd3Q99LE3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Lysmd3Q99LE3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.76■□□□□ 0.75
Lysmd3Q99LE3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lysmd3Q99LE3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lysmd3Q99LE3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lysmd3Q99LE3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lysmd3Q99LE3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lysmd3Q99LE3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lysmd3Q99LE3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lysmd3Q99LE3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lysmd3Q99LE3 Gm13534-201ENSMUST00000121169 513 ntBASIC19.75■□□□□ 0.75
Lysmd3Q99LE3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Lysmd3Q99LE3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lysmd3Q99LE3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Lysmd3Q99LE3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.75■□□□□ 0.75
Lysmd3Q99LE3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.75■□□□□ 0.75
Lysmd3Q99LE3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lysmd3Q99LE3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lysmd3Q99LE3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lysmd3Q99LE3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lysmd3Q99LE3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lysmd3Q99LE3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lysmd3Q99LE3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.74■□□□□ 0.75
Lysmd3Q99LE3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Lysmd3Q99LE3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lysmd3Q99LE3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Lysmd3Q99LE3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lysmd3Q99LE3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lysmd3Q99LE3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.73■□□□□ 0.75
Lysmd3Q99LE3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Lysmd3Q99LE3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.73■□□□□ 0.75
Lysmd3Q99LE3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.73■□□□□ 0.75
Lysmd3Q99LE3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.73■□□□□ 0.75
Lysmd3Q99LE3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lysmd3Q99LE3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Lysmd3Q99LE3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Lysmd3Q99LE3 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.72■□□□□ 0.75
Lysmd3Q99LE3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.72■□□□□ 0.75
Lysmd3Q99LE3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lysmd3Q99LE3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lysmd3Q99LE3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lysmd3Q99LE3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd3Q99LE3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Lysmd3Q99LE3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd3Q99LE3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd3Q99LE3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.71■□□□□ 0.75
Lysmd3Q99LE3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd3Q99LE3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd3Q99LE3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd3Q99LE3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd3Q99LE3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd3Q99LE3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd3Q99LE3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd3Q99LE3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lysmd3Q99LE3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Lysmd3Q99LE3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lysmd3Q99LE3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lysmd3Q99LE3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lysmd3Q99LE3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lysmd3Q99LE3 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.7■□□□□ 0.74
Lysmd3Q99LE3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
Lysmd3Q99LE3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lysmd3Q99LE3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lysmd3Q99LE3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lysmd3Q99LE3 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.69■□□□□ 0.74
Lysmd3Q99LE3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lysmd3Q99LE3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Lysmd3Q99LE3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lysmd3Q99LE3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Lysmd3Q99LE3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lysmd3Q99LE3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lysmd3Q99LE3 Gm6420-201ENSMUST00000193885 723 ntBASIC19.69■□□□□ 0.74
Lysmd3Q99LE3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.69■□□□□ 0.74
Lysmd3Q99LE3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Lysmd3Q99LE3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lysmd3Q99LE3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lysmd3Q99LE3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lysmd3Q99LE3 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.69■□□□□ 0.74
Lysmd3Q99LE3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lysmd3Q99LE3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lysmd3Q99LE3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lysmd3Q99LE3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lysmd3Q99LE3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lysmd3Q99LE3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms