Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cstf1Q99LC2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cstf1Q99LC2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cstf1Q99LC2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cstf1Q99LC2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cstf1Q99LC2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cstf1Q99LC2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cstf1Q99LC2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cstf1Q99LC2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cstf1Q99LC2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19■□□□□ 0.63
Cstf1Q99LC2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19■□□□□ 0.63
Cstf1Q99LC2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cstf1Q99LC2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cstf1Q99LC2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cstf1Q99LC2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cstf1Q99LC2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cstf1Q99LC2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cstf1Q99LC2 Gm715-201ENSMUST00000117865 831 ntBASIC18.99■□□□□ 0.63
Cstf1Q99LC2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cstf1Q99LC2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cstf1Q99LC2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cstf1Q99LC2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cstf1Q99LC2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.99■□□□□ 0.63
Cstf1Q99LC2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cstf1Q99LC2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cstf1Q99LC2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cstf1Q99LC2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cstf1Q99LC2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.98■□□□□ 0.63
Cstf1Q99LC2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Cstf1Q99LC2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cstf1Q99LC2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cstf1Q99LC2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cstf1Q99LC2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cstf1Q99LC2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cstf1Q99LC2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.97■□□□□ 0.63
Cstf1Q99LC2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cstf1Q99LC2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cstf1Q99LC2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cstf1Q99LC2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.97■□□□□ 0.63
Cstf1Q99LC2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cstf1Q99LC2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.97■□□□□ 0.63
Cstf1Q99LC2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.97■□□□□ 0.63
Cstf1Q99LC2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cstf1Q99LC2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Cstf1Q99LC2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cstf1Q99LC2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cstf1Q99LC2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cstf1Q99LC2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.96■□□□□ 0.63
Cstf1Q99LC2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.96■□□□□ 0.63
Cstf1Q99LC2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.96■□□□□ 0.63
Cstf1Q99LC2 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.96■□□□□ 0.63
Cstf1Q99LC2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cstf1Q99LC2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cstf1Q99LC2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cstf1Q99LC2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cstf1Q99LC2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Gm2559-201ENSMUST00000201323 363 ntBASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cstf1Q99LC2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf1Q99LC2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf1Q99LC2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf1Q99LC2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf1Q99LC2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf1Q99LC2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cstf1Q99LC2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cstf1Q99LC2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cstf1Q99LC2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cstf1Q99LC2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cstf1Q99LC2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cstf1Q99LC2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cstf1Q99LC2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf1Q99LC2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf1Q99LC2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cstf1Q99LC2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cstf1Q99LC2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf1Q99LC2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf1Q99LC2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf1Q99LC2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.93■□□□□ 0.62
Cstf1Q99LC2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.93■□□□□ 0.62
Cstf1Q99LC2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms