Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.97■□□□□ 0.31
Thumpd1Q99J36 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd1Q99J36 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.97■□□□□ 0.31
Thumpd1Q99J36 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd1Q99J36 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.97■□□□□ 0.31
Thumpd1Q99J36 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd1Q99J36 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd1Q99J36 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Thumpd1Q99J36 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd1Q99J36 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd1Q99J36 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd1Q99J36 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd1Q99J36 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Thumpd1Q99J36 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd1Q99J36 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd1Q99J36 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd1Q99J36 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd1Q99J36 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd1Q99J36 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.96■□□□□ 0.31
Thumpd1Q99J36 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.96■□□□□ 0.31
Thumpd1Q99J36 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.96■□□□□ 0.31
Thumpd1Q99J36 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd1Q99J36 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd1Q99J36 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd1Q99J36 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.96■□□□□ 0.31
Thumpd1Q99J36 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd1Q99J36 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd1Q99J36 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.96■□□□□ 0.3
Thumpd1Q99J36 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.96■□□□□ 0.3
Thumpd1Q99J36 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Thumpd1Q99J36 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Thumpd1Q99J36 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd1Q99J36 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Thumpd1Q99J36 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd1Q99J36 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd1Q99J36 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd1Q99J36 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd1Q99J36 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Thumpd1Q99J36 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.94■□□□□ 0.3
Thumpd1Q99J36 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd1Q99J36 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd1Q99J36 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Thumpd1Q99J36 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.94■□□□□ 0.3
Thumpd1Q99J36 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd1Q99J36 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd1Q99J36 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd1Q99J36 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd1Q99J36 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd1Q99J36 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Thumpd1Q99J36 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd1Q99J36 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Thumpd1Q99J36 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd1Q99J36 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd1Q99J36 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd1Q99J36 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd1Q99J36 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd1Q99J36 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd1Q99J36 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.93■□□□□ 0.3
Thumpd1Q99J36 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Thumpd1Q99J36 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd1Q99J36 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.92■□□□□ 0.3
Thumpd1Q99J36 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Thumpd1Q99J36 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Thumpd1Q99J36 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Thumpd1Q99J36 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.92■□□□□ 0.3
Thumpd1Q99J36 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.92■□□□□ 0.3
Thumpd1Q99J36 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.92■□□□□ 0.3
Thumpd1Q99J36 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Thumpd1Q99J36 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Thumpd1Q99J36 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Thumpd1Q99J36 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Thumpd1Q99J36 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Thumpd1Q99J36 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Thumpd1Q99J36 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Thumpd1Q99J36 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Thumpd1Q99J36 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Thumpd1Q99J36 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Thumpd1Q99J36 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Thumpd1Q99J36 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Thumpd1Q99J36 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Thumpd1Q99J36 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Thumpd1Q99J36 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Thumpd1Q99J36 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms