Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc1bQ920F6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc1bQ920F6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc1bQ920F6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc1bQ920F6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smc1bQ920F6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.87■■□□□ 1.09
Smc1bQ920F6 Gm5408-201ENSMUST00000197998 747 ntBASIC21.87■■□□□ 1.09
Smc1bQ920F6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Smc1bQ920F6 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.87■■□□□ 1.09
Smc1bQ920F6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc1bQ920F6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc1bQ920F6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc1bQ920F6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc1bQ920F6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Smc1bQ920F6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc1bQ920F6 Gm13148-201ENSMUST00000118892 745 ntBASIC21.86■■□□□ 1.09
Smc1bQ920F6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.86■■□□□ 1.09
Smc1bQ920F6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.86■■□□□ 1.09
Smc1bQ920F6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc1bQ920F6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc1bQ920F6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Smc1bQ920F6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc1bQ920F6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc1bQ920F6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc1bQ920F6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc1bQ920F6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc1bQ920F6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc1bQ920F6 Gm7290-201ENSMUST00000104990 617 ntBASIC21.85■■□□□ 1.09
Smc1bQ920F6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.85■■□□□ 1.09
Smc1bQ920F6 Gm12918-201ENSMUST00000120234 636 ntBASIC21.85■■□□□ 1.09
Smc1bQ920F6 Gm15710-201ENSMUST00000121821 636 ntBASIC21.85■■□□□ 1.09
Smc1bQ920F6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.85■■□□□ 1.09
Smc1bQ920F6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.85■■□□□ 1.09
Smc1bQ920F6 Gm5075-201ENSMUST00000196916 622 ntBASIC21.85■■□□□ 1.09
Smc1bQ920F6 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.85■■□□□ 1.09
Smc1bQ920F6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.85■■□□□ 1.09
Smc1bQ920F6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.85■■□□□ 1.09
Smc1bQ920F6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc1bQ920F6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc1bQ920F6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc1bQ920F6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc1bQ920F6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Smc1bQ920F6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.84■■□□□ 1.09
Smc1bQ920F6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.84■■□□□ 1.09
Smc1bQ920F6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc1bQ920F6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.84■■□□□ 1.09
Smc1bQ920F6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Smc1bQ920F6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Smc1bQ920F6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc1bQ920F6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc1bQ920F6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc1bQ920F6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc1bQ920F6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc1bQ920F6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc1bQ920F6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.83■■□□□ 1.09
Smc1bQ920F6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.83■■□□□ 1.09
Smc1bQ920F6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc1bQ920F6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc1bQ920F6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.83■■□□□ 1.09
Smc1bQ920F6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
Smc1bQ920F6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Smc1bQ920F6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc1bQ920F6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc1bQ920F6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.83■■□□□ 1.09
Smc1bQ920F6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc1bQ920F6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smc1bQ920F6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc1bQ920F6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc1bQ920F6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smc1bQ920F6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smc1bQ920F6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.83■■□□□ 1.08
Smc1bQ920F6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smc1bQ920F6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smc1bQ920F6 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.82■■□□□ 1.08
Smc1bQ920F6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Smc1bQ920F6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.82■■□□□ 1.08
Smc1bQ920F6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smc1bQ920F6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.82■■□□□ 1.08
Smc1bQ920F6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.82■■□□□ 1.08
Smc1bQ920F6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.82■■□□□ 1.08
Smc1bQ920F6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc1bQ920F6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.82■■□□□ 1.08
Smc1bQ920F6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Smc1bQ920F6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smc1bQ920F6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc1bQ920F6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smc1bQ920F6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.81■■□□□ 1.08
Smc1bQ920F6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc1bQ920F6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smc1bQ920F6 Gm20049-201ENSMUST00000219950 730 ntBASIC21.81■■□□□ 1.08
Smc1bQ920F6 Gm10812-201ENSMUST00000099864 546 ntBASIC21.81■■□□□ 1.08
Smc1bQ920F6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc1bQ920F6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc1bQ920F6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.8■■□□□ 1.08
Smc1bQ920F6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.8■■□□□ 1.08
Smc1bQ920F6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc1bQ920F6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smc1bQ920F6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc1bQ920F6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc1bQ920F6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms