Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb20Q91XZ9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb20Q91XZ9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhb20Q91XZ9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb20Q91XZ9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb20Q91XZ9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb20Q91XZ9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb20Q91XZ9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb20Q91XZ9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Pcdhb20Q91XZ9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb20Q91XZ9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb20Q91XZ9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb20Q91XZ9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb20Q91XZ9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb20Q91XZ9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb20Q91XZ9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb20Q91XZ9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhb20Q91XZ9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb20Q91XZ9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb20Q91XZ9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb20Q91XZ9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb20Q91XZ9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb20Q91XZ9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb20Q91XZ9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb20Q91XZ9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdhb20Q91XZ9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhb20Q91XZ9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb20Q91XZ9 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb20Q91XZ9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb20Q91XZ9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb20Q91XZ9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb20Q91XZ9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdhb20Q91XZ9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhb20Q91XZ9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb20Q91XZ9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb20Q91XZ9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb20Q91XZ9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb20Q91XZ9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb20Q91XZ9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb20Q91XZ9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.24■□□□□ 0.51
Pcdhb20Q91XZ9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb20Q91XZ9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb20Q91XZ9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb20Q91XZ9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb20Q91XZ9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb20Q91XZ9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhb20Q91XZ9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb20Q91XZ9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb20Q91XZ9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb20Q91XZ9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhb20Q91XZ9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb20Q91XZ9 Gm13534-201ENSMUST00000121169 513 ntBASIC18.23■□□□□ 0.51
Pcdhb20Q91XZ9 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.23■□□□□ 0.51
Pcdhb20Q91XZ9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.23■□□□□ 0.51
Pcdhb20Q91XZ9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb20Q91XZ9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhb20Q91XZ9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb20Q91XZ9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb20Q91XZ9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb20Q91XZ9 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb20Q91XZ9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb20Q91XZ9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb20Q91XZ9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb20Q91XZ9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.22■□□□□ 0.51
Pcdhb20Q91XZ9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb20Q91XZ9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhb20Q91XZ9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhb20Q91XZ9 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC18.22■□□□□ 0.51
Pcdhb20Q91XZ9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhb20Q91XZ9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb20Q91XZ9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Pcdhb20Q91XZ9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb20Q91XZ9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhb20Q91XZ9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb20Q91XZ9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Pcdhb20Q91XZ9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb20Q91XZ9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms