Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.61■□□□□ 0.73
Pcdhb6Q91XZ4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb6Q91XZ4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb6Q91XZ4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb6Q91XZ4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb6Q91XZ4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb6Q91XZ4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb6Q91XZ4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Pcdhb6Q91XZ4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb6Q91XZ4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb6Q91XZ4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb6Q91XZ4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb6Q91XZ4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb6Q91XZ4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb6Q91XZ4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb6Q91XZ4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb6Q91XZ4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb6Q91XZ4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb6Q91XZ4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pcdhb6Q91XZ4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb6Q91XZ4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb6Q91XZ4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb6Q91XZ4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb6Q91XZ4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pcdhb6Q91XZ4 BC021767-201ENSMUST00000126387 1716 ntBASIC19.59■□□□□ 0.73
Pcdhb6Q91XZ4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb6Q91XZ4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pcdhb6Q91XZ4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb6Q91XZ4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pcdhb6Q91XZ4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb6Q91XZ4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb6Q91XZ4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb6Q91XZ4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.58■□□□□ 0.73
Pcdhb6Q91XZ4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb6Q91XZ4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Pcdhb6Q91XZ4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb6Q91XZ4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb6Q91XZ4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb6Q91XZ4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.58■□□□□ 0.72
Pcdhb6Q91XZ4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb6Q91XZ4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb6Q91XZ4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb6Q91XZ4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb6Q91XZ4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb6Q91XZ4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb6Q91XZ4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb6Q91XZ4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb6Q91XZ4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb6Q91XZ4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb6Q91XZ4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.57■□□□□ 0.72
Pcdhb6Q91XZ4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.57■□□□□ 0.72
Pcdhb6Q91XZ4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.57■□□□□ 0.72
Pcdhb6Q91XZ4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb6Q91XZ4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.56■□□□□ 0.72
Pcdhb6Q91XZ4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb6Q91XZ4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb6Q91XZ4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb6Q91XZ4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb6Q91XZ4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb6Q91XZ4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb6Q91XZ4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb6Q91XZ4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb6Q91XZ4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb6Q91XZ4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhb6Q91XZ4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb6Q91XZ4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Pcdhb6Q91XZ4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms