Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 Gm37179-201ENSMUST00000194862 823 ntBASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 Gm10033-202ENSMUST00000211874 928 ntBASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga9Q91XX9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga9Q91XX9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhga9Q91XX9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga9Q91XX9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.8■□□□□ 0.6
Pcdhga9Q91XX9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.8■□□□□ 0.6
Pcdhga9Q91XX9 AV356131-201ENSMUST00000206201 750 ntBASIC18.8■□□□□ 0.6
Pcdhga9Q91XX9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga9Q91XX9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga9Q91XX9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga9Q91XX9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhga9Q91XX9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga9Q91XX9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhga9Q91XX9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcdhga9Q91XX9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga9Q91XX9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga9Q91XX9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga9Q91XX9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga9Q91XX9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhga9Q91XX9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga9Q91XX9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga9Q91XX9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhga9Q91XX9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.79■□□□□ 0.6
Pcdhga9Q91XX9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Pcdhga9Q91XX9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga9Q91XX9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga9Q91XX9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga9Q91XX9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhga9Q91XX9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga9Q91XX9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga9Q91XX9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga9Q91XX9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Pcdhga9Q91XX9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhga9Q91XX9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhga9Q91XX9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga9Q91XX9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhga9Q91XX9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Pcdhga9Q91XX9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhga9Q91XX9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhga9Q91XX9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhga9Q91XX9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga9Q91XX9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga9Q91XX9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga9Q91XX9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga9Q91XX9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga9Q91XX9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga9Q91XX9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga9Q91XX9 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.77■□□□□ 0.6
Pcdhga9Q91XX9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga9Q91XX9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga9Q91XX9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga9Q91XX9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhga9Q91XX9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Gm7860-201ENSMUST00000121190 879 ntBASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga9Q91XX9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcdhga9Q91XX9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms