Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.97■□□□□ 0.47
Pcdhgc3Q91XX1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgc3Q91XX1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.97■□□□□ 0.47
Pcdhgc3Q91XX1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhgc3Q91XX1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdhgc3Q91XX1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgc3Q91XX1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Pcdhgc3Q91XX1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.96■□□□□ 0.47
Pcdhgc3Q91XX1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhgc3Q91XX1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhgc3Q91XX1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgc3Q91XX1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgc3Q91XX1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgc3Q91XX1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgc3Q91XX1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgc3Q91XX1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhgc3Q91XX1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdhgc3Q91XX1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgc3Q91XX1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhgc3Q91XX1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhgc3Q91XX1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgc3Q91XX1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.95■□□□□ 0.46
Pcdhgc3Q91XX1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgc3Q91XX1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgc3Q91XX1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgc3Q91XX1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgc3Q91XX1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhgc3Q91XX1 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.94■□□□□ 0.46
Pcdhgc3Q91XX1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdhgc3Q91XX1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhgc3Q91XX1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgc3Q91XX1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgc3Q91XX1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgc3Q91XX1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgc3Q91XX1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgc3Q91XX1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhgc3Q91XX1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgc3Q91XX1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgc3Q91XX1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhgc3Q91XX1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgc3Q91XX1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.94■□□□□ 0.46
Pcdhgc3Q91XX1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhgc3Q91XX1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgc3Q91XX1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Gm40881-201ENSMUST00000223397 166 ntBASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Pcdhgc3Q91XX1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc3Q91XX1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdhgc3Q91XX1 Gm43530-201ENSMUST00000195920 274 ntBASIC17.92■□□□□ 0.46
Pcdhgc3Q91XX1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdhgc3Q91XX1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc3Q91XX1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc3Q91XX1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Pcdhgc3Q91XX1 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.92■□□□□ 0.46
Pcdhgc3Q91XX1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Pcdhgc3Q91XX1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc3Q91XX1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc3Q91XX1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc3Q91XX1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc3Q91XX1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc3Q91XX1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc3Q91XX1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.91■□□□□ 0.46
Pcdhgc3Q91XX1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhgc3Q91XX1 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.91■□□□□ 0.46
Pcdhgc3Q91XX1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc3Q91XX1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhgc3Q91XX1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc3Q91XX1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc3Q91XX1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhgc3Q91XX1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Pcdhgc3Q91XX1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc3Q91XX1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc3Q91XX1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc3Q91XX1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.9■□□□□ 0.46
Pcdhgc3Q91XX1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc3Q91XX1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc3Q91XX1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc3Q91XX1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc3Q91XX1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhgc3Q91XX1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhgc3Q91XX1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc3Q91XX1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc3Q91XX1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms