Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
StrcQ8VIM6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
StrcQ8VIM6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
StrcQ8VIM6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
StrcQ8VIM6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC23.2■■□□□ 1.3
StrcQ8VIM6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC23.2■■□□□ 1.3
StrcQ8VIM6 Alkbh1-212ENSMUST00000185301 408 ntBASIC23.2■■□□□ 1.3
StrcQ8VIM6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
StrcQ8VIM6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
StrcQ8VIM6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
StrcQ8VIM6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
StrcQ8VIM6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
StrcQ8VIM6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
StrcQ8VIM6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
StrcQ8VIM6 Gm8668-201ENSMUST00000120559 1447 ntBASIC23.2■■□□□ 1.3
StrcQ8VIM6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC23.19■■□□□ 1.3
StrcQ8VIM6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
StrcQ8VIM6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
StrcQ8VIM6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
StrcQ8VIM6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
StrcQ8VIM6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
StrcQ8VIM6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
StrcQ8VIM6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
StrcQ8VIM6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
StrcQ8VIM6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
StrcQ8VIM6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
StrcQ8VIM6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
StrcQ8VIM6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC23.19■■□□□ 1.3
StrcQ8VIM6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
StrcQ8VIM6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
StrcQ8VIM6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
StrcQ8VIM6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
StrcQ8VIM6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
StrcQ8VIM6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
StrcQ8VIM6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
StrcQ8VIM6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
StrcQ8VIM6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
StrcQ8VIM6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
StrcQ8VIM6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
StrcQ8VIM6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
StrcQ8VIM6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.17■■□□□ 1.3
StrcQ8VIM6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
StrcQ8VIM6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
StrcQ8VIM6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
StrcQ8VIM6 H2-K2-201ENSMUST00000174250 1049 ntBASIC23.16■■□□□ 1.3
StrcQ8VIM6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC23.16■■□□□ 1.3
StrcQ8VIM6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC23.16■■□□□ 1.3
StrcQ8VIM6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.16■■□□□ 1.3
StrcQ8VIM6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
StrcQ8VIM6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
StrcQ8VIM6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
StrcQ8VIM6 Gm5417-201ENSMUST00000079706 384 ntBASIC23.16■■□□□ 1.3
StrcQ8VIM6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
StrcQ8VIM6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
StrcQ8VIM6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
StrcQ8VIM6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
StrcQ8VIM6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
StrcQ8VIM6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
StrcQ8VIM6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
StrcQ8VIM6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
StrcQ8VIM6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
StrcQ8VIM6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
StrcQ8VIM6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC23.15■■□□□ 1.3
StrcQ8VIM6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
StrcQ8VIM6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
StrcQ8VIM6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
StrcQ8VIM6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
StrcQ8VIM6 Gm6433-201ENSMUST00000118634 875 ntBASIC23.14■■□□□ 1.29
StrcQ8VIM6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC23.14■■□□□ 1.29
StrcQ8VIM6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
StrcQ8VIM6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
StrcQ8VIM6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
StrcQ8VIM6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
StrcQ8VIM6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC23.13■■□□□ 1.29
StrcQ8VIM6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
StrcQ8VIM6 Gm32699-201ENSMUST00000221728 1988 ntBASIC23.13■■□□□ 1.29
StrcQ8VIM6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
StrcQ8VIM6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
StrcQ8VIM6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
StrcQ8VIM6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
StrcQ8VIM6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
StrcQ8VIM6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC23.12■■□□□ 1.29
StrcQ8VIM6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
StrcQ8VIM6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
StrcQ8VIM6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.12■■□□□ 1.29
StrcQ8VIM6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
StrcQ8VIM6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
StrcQ8VIM6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
StrcQ8VIM6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
StrcQ8VIM6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
StrcQ8VIM6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
StrcQ8VIM6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
StrcQ8VIM6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
StrcQ8VIM6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
StrcQ8VIM6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
StrcQ8VIM6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC23.11■■□□□ 1.29
StrcQ8VIM6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
StrcQ8VIM6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
StrcQ8VIM6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC23.11■■□□□ 1.29
StrcQ8VIM6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms