Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpa1Q8VEE4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpa1Q8VEE4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpa1Q8VEE4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.16■□□□□ 0.66
Rpa1Q8VEE4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpa1Q8VEE4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpa1Q8VEE4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpa1Q8VEE4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpa1Q8VEE4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Gm5812-201ENSMUST00000061073 957 ntBASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.15■□□□□ 0.66
Rpa1Q8VEE4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Rpa1Q8VEE4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rpa1Q8VEE4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpa1Q8VEE4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpa1Q8VEE4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rpa1Q8VEE4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rpa1Q8VEE4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpa1Q8VEE4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpa1Q8VEE4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpa1Q8VEE4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpa1Q8VEE4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpa1Q8VEE4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpa1Q8VEE4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpa1Q8VEE4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpa1Q8VEE4 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.13■□□□□ 0.65
Rpa1Q8VEE4 Gm9870-201ENSMUST00000063874 645 ntBASIC19.13■□□□□ 0.65
Rpa1Q8VEE4 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.13■□□□□ 0.65
Rpa1Q8VEE4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpa1Q8VEE4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpa1Q8VEE4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpa1Q8VEE4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.12■□□□□ 0.65
Rpa1Q8VEE4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpa1Q8VEE4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpa1Q8VEE4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpa1Q8VEE4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpa1Q8VEE4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Rpa1Q8VEE4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rpa1Q8VEE4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpa1Q8VEE4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.12■□□□□ 0.65
Rpa1Q8VEE4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rpa1Q8VEE4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rpa1Q8VEE4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpa1Q8VEE4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpa1Q8VEE4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rpa1Q8VEE4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rpa1Q8VEE4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rpa1Q8VEE4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rpa1Q8VEE4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpa1Q8VEE4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rpa1Q8VEE4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpa1Q8VEE4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpa1Q8VEE4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rpa1Q8VEE4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpa1Q8VEE4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpa1Q8VEE4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpa1Q8VEE4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpa1Q8VEE4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Rpa1Q8VEE4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpa1Q8VEE4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpa1Q8VEE4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.1■□□□□ 0.65
Rpa1Q8VEE4 Etf1-202ENSMUST00000180351 108 ntBASIC19.1■□□□□ 0.65
Rpa1Q8VEE4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpa1Q8VEE4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rpa1Q8VEE4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rpa1Q8VEE4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rpa1Q8VEE4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpa1Q8VEE4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpa1Q8VEE4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
Rpa1Q8VEE4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Rpa1Q8VEE4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpa1Q8VEE4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rpa1Q8VEE4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpa1Q8VEE4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rpa1Q8VEE4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpa1Q8VEE4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
Rpa1Q8VEE4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rpa1Q8VEE4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.09■□□□□ 0.65
Rpa1Q8VEE4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.09■□□□□ 0.65
Rpa1Q8VEE4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpa1Q8VEE4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms