Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.61■□□□□ 0.73
Sh3kbp1Q8R550 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.61■□□□□ 0.73
Sh3kbp1Q8R550 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3kbp1Q8R550 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3kbp1Q8R550 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3kbp1Q8R550 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Sh3kbp1Q8R550 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3kbp1Q8R550 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.6■□□□□ 0.73
Sh3kbp1Q8R550 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.6■□□□□ 0.73
Sh3kbp1Q8R550 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.6■□□□□ 0.73
Sh3kbp1Q8R550 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3kbp1Q8R550 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3kbp1Q8R550 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3kbp1Q8R550 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Sh3kbp1Q8R550 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3kbp1Q8R550 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3kbp1Q8R550 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sh3kbp1Q8R550 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.58■□□□□ 0.73
Sh3kbp1Q8R550 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sh3kbp1Q8R550 Gm27011-201ENSMUST00000182352 972 ntBASIC19.58■□□□□ 0.72
Sh3kbp1Q8R550 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh3kbp1Q8R550 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Sh3kbp1Q8R550 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Sh3kbp1Q8R550 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh3kbp1Q8R550 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh3kbp1Q8R550 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh3kbp1Q8R550 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3kbp1Q8R550 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3kbp1Q8R550 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3kbp1Q8R550 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3kbp1Q8R550 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Sh3kbp1Q8R550 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3kbp1Q8R550 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3kbp1Q8R550 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3kbp1Q8R550 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3kbp1Q8R550 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3kbp1Q8R550 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3kbp1Q8R550 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3kbp1Q8R550 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3kbp1Q8R550 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.56■□□□□ 0.72
Sh3kbp1Q8R550 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3kbp1Q8R550 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3kbp1Q8R550 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sh3kbp1Q8R550 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3kbp1Q8R550 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3kbp1Q8R550 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3kbp1Q8R550 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Sh3kbp1Q8R550 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3kbp1Q8R550 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3kbp1Q8R550 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3kbp1Q8R550 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3kbp1Q8R550 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3kbp1Q8R550 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3kbp1Q8R550 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Sh3kbp1Q8R550 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3kbp1Q8R550 Gm10602-201ENSMUST00000098239 609 ntBASIC19.55■□□□□ 0.72
Sh3kbp1Q8R550 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3kbp1Q8R550 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3kbp1Q8R550 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3kbp1Q8R550 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3kbp1Q8R550 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3kbp1Q8R550 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3kbp1Q8R550 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.54■□□□□ 0.72
Sh3kbp1Q8R550 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.54■□□□□ 0.72
Sh3kbp1Q8R550 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3kbp1Q8R550 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Sh3kbp1Q8R550 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3kbp1Q8R550 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3kbp1Q8R550 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.54■□□□□ 0.72
Sh3kbp1Q8R550 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3kbp1Q8R550 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.54■□□□□ 0.72
Sh3kbp1Q8R550 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Sh3kbp1Q8R550 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3kbp1Q8R550 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3kbp1Q8R550 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.53■□□□□ 0.72
Sh3kbp1Q8R550 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3kbp1Q8R550 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3kbp1Q8R550 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Sh3kbp1Q8R550 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.52■□□□□ 0.72
Sh3kbp1Q8R550 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.52■□□□□ 0.72
Sh3kbp1Q8R550 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3kbp1Q8R550 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sh3kbp1Q8R550 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms