Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgref1Q8R1U2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgref1Q8R1U2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.3■□□□□ 0.68
Cgref1Q8R1U2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgref1Q8R1U2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgref1Q8R1U2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgref1Q8R1U2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgref1Q8R1U2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cgref1Q8R1U2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cgref1Q8R1U2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cgref1Q8R1U2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Cgref1Q8R1U2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cgref1Q8R1U2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cgref1Q8R1U2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cgref1Q8R1U2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cgref1Q8R1U2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cgref1Q8R1U2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cgref1Q8R1U2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cgref1Q8R1U2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.28■□□□□ 0.68
Cgref1Q8R1U2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cgref1Q8R1U2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.28■□□□□ 0.68
Cgref1Q8R1U2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cgref1Q8R1U2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cgref1Q8R1U2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cgref1Q8R1U2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cgref1Q8R1U2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cgref1Q8R1U2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cgref1Q8R1U2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.27■□□□□ 0.68
Cgref1Q8R1U2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cgref1Q8R1U2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cgref1Q8R1U2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cgref1Q8R1U2 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.27■□□□□ 0.68
Cgref1Q8R1U2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cgref1Q8R1U2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Cgref1Q8R1U2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cgref1Q8R1U2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cgref1Q8R1U2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cgref1Q8R1U2 Gm13238-201ENSMUST00000117655 780 ntBASIC19.26■□□□□ 0.67
Cgref1Q8R1U2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Cgref1Q8R1U2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cgref1Q8R1U2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cgref1Q8R1U2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cgref1Q8R1U2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cgref1Q8R1U2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cgref1Q8R1U2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.25■□□□□ 0.67
Cgref1Q8R1U2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cgref1Q8R1U2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.25■□□□□ 0.67
Cgref1Q8R1U2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.25■□□□□ 0.67
Cgref1Q8R1U2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.25■□□□□ 0.67
Cgref1Q8R1U2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cgref1Q8R1U2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cgref1Q8R1U2 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.25■□□□□ 0.67
Cgref1Q8R1U2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cgref1Q8R1U2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cgref1Q8R1U2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cgref1Q8R1U2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cgref1Q8R1U2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cgref1Q8R1U2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cgref1Q8R1U2 Mir6236-201ENSMUST00000184437 123 ntBASIC19.23■□□□□ 0.67
Cgref1Q8R1U2 Gm5921-201ENSMUST00000075898 882 ntBASIC19.23■□□□□ 0.67
Cgref1Q8R1U2 Gm10232-201ENSMUST00000089221 720 ntBASIC19.23■□□□□ 0.67
Cgref1Q8R1U2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cgref1Q8R1U2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cgref1Q8R1U2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cgref1Q8R1U2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cgref1Q8R1U2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cgref1Q8R1U2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms