Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Sf3a1Q8K4Z5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sf3a1Q8K4Z5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Sf3a1Q8K4Z5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC23.29■■□□□ 1.32
Sf3a1Q8K4Z5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Sf3a1Q8K4Z5 Hsf1-204ENSMUST00000226872 2104 ntBASIC23.29■■□□□ 1.32
Sf3a1Q8K4Z5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sf3a1Q8K4Z5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sf3a1Q8K4Z5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC23.28■■□□□ 1.32
Sf3a1Q8K4Z5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sf3a1Q8K4Z5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sf3a1Q8K4Z5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.28■■□□□ 1.32
Sf3a1Q8K4Z5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC23.28■■□□□ 1.32
Sf3a1Q8K4Z5 Gm42642-201ENSMUST00000200683 355 ntBASIC23.28■■□□□ 1.32
Sf3a1Q8K4Z5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sf3a1Q8K4Z5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Sf3a1Q8K4Z5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Sf3a1Q8K4Z5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Sf3a1Q8K4Z5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Sf3a1Q8K4Z5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Sf3a1Q8K4Z5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC23.27■■□□□ 1.32
Sf3a1Q8K4Z5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Sf3a1Q8K4Z5 Gm13234-201ENSMUST00000120010 747 ntBASIC23.27■■□□□ 1.32
Sf3a1Q8K4Z5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC23.27■■□□□ 1.32
Sf3a1Q8K4Z5 Gm42778-201ENSMUST00000199644 553 ntBASIC23.27■■□□□ 1.32
Sf3a1Q8K4Z5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sf3a1Q8K4Z5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sf3a1Q8K4Z5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sf3a1Q8K4Z5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sf3a1Q8K4Z5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sf3a1Q8K4Z5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Sf3a1Q8K4Z5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sf3a1Q8K4Z5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Sf3a1Q8K4Z5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Sf3a1Q8K4Z5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sf3a1Q8K4Z5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sf3a1Q8K4Z5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sf3a1Q8K4Z5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sf3a1Q8K4Z5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sf3a1Q8K4Z5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sf3a1Q8K4Z5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Sf3a1Q8K4Z5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sf3a1Q8K4Z5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sf3a1Q8K4Z5 Gm10033-202ENSMUST00000211874 928 ntBASIC23.25■■□□□ 1.31
Sf3a1Q8K4Z5 Gm37352-201ENSMUST00000193908 2181 ntBASIC23.25■■□□□ 1.31
Sf3a1Q8K4Z5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Sf3a1Q8K4Z5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Sf3a1Q8K4Z5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sf3a1Q8K4Z5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Sf3a1Q8K4Z5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Sf3a1Q8K4Z5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Sf3a1Q8K4Z5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC23.24■■□□□ 1.31
Sf3a1Q8K4Z5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sf3a1Q8K4Z5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sf3a1Q8K4Z5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sf3a1Q8K4Z5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sf3a1Q8K4Z5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sf3a1Q8K4Z5 Gm43545-201ENSMUST00000196765 2779 ntBASIC23.23■■□□□ 1.31
Sf3a1Q8K4Z5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC23.23■■□□□ 1.31
Sf3a1Q8K4Z5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC23.23■■□□□ 1.31
Sf3a1Q8K4Z5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Sf3a1Q8K4Z5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sf3a1Q8K4Z5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sf3a1Q8K4Z5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sf3a1Q8K4Z5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Sf3a1Q8K4Z5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sf3a1Q8K4Z5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sf3a1Q8K4Z5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sf3a1Q8K4Z5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC23.22■■□□□ 1.31
Sf3a1Q8K4Z5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Sf3a1Q8K4Z5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sf3a1Q8K4Z5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Sf3a1Q8K4Z5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Sf3a1Q8K4Z5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sf3a1Q8K4Z5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Sf3a1Q8K4Z5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Sf3a1Q8K4Z5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Sf3a1Q8K4Z5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sf3a1Q8K4Z5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Sf3a1Q8K4Z5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Sf3a1Q8K4Z5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.21■■□□□ 1.31
Sf3a1Q8K4Z5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Sf3a1Q8K4Z5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC23.21■■□□□ 1.31
Sf3a1Q8K4Z5 CT010467.1-202ENSMUST00000205406 714 ntBASIC23.21■■□□□ 1.31
Sf3a1Q8K4Z5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
Sf3a1Q8K4Z5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sf3a1Q8K4Z5 Gm13146-201ENSMUST00000118508 780 ntBASIC23.2■■□□□ 1.3
Sf3a1Q8K4Z5 Gm26571-201ENSMUST00000181399 666 ntBASIC23.2■■□□□ 1.3
Sf3a1Q8K4Z5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC23.2■■□□□ 1.3
Sf3a1Q8K4Z5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.2■■□□□ 1.3
Sf3a1Q8K4Z5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC23.2■■□□□ 1.3
Sf3a1Q8K4Z5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC23.2■■□□□ 1.3
Sf3a1Q8K4Z5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
Sf3a1Q8K4Z5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC23.2■■□□□ 1.3
Sf3a1Q8K4Z5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sf3a1Q8K4Z5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Sf3a1Q8K4Z5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Sf3a1Q8K4Z5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Sf3a1Q8K4Z5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sf3a1Q8K4Z5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms