Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Ddx54Q8K4L0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ddx54Q8K4L0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Ddx54Q8K4L0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
Ddx54Q8K4L0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ddx54Q8K4L0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ddx54Q8K4L0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ddx54Q8K4L0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Ddx54Q8K4L0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Ddx54Q8K4L0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ddx54Q8K4L0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC25.14■■□□□ 1.62
Ddx54Q8K4L0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC25.14■■□□□ 1.62
Ddx54Q8K4L0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC25.14■■□□□ 1.62
Ddx54Q8K4L0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC25.13■■□□□ 1.61
Ddx54Q8K4L0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ddx54Q8K4L0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ddx54Q8K4L0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
Ddx54Q8K4L0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx54Q8K4L0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx54Q8K4L0 Gm27741-201ENSMUST00000185060 237 ntBASIC25.12■■□□□ 1.61
Ddx54Q8K4L0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx54Q8K4L0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx54Q8K4L0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx54Q8K4L0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx54Q8K4L0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx54Q8K4L0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC25.12■■□□□ 1.61
Ddx54Q8K4L0 Gm15043-201ENSMUST00000118843 1543 ntBASIC25.12■■□□□ 1.61
Ddx54Q8K4L0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ddx54Q8K4L0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Ddx54Q8K4L0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ddx54Q8K4L0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ddx54Q8K4L0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ddx54Q8K4L0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ddx54Q8K4L0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC25.1■■□□□ 1.61
Ddx54Q8K4L0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ddx54Q8K4L0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ddx54Q8K4L0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ddx54Q8K4L0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ddx54Q8K4L0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Ddx54Q8K4L0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Ddx54Q8K4L0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ddx54Q8K4L0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ddx54Q8K4L0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx54Q8K4L0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx54Q8K4L0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx54Q8K4L0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx54Q8K4L0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Ddx54Q8K4L0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Ddx54Q8K4L0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC25.08■■□□□ 1.61
Ddx54Q8K4L0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
Ddx54Q8K4L0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ddx54Q8K4L0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Ddx54Q8K4L0 Gm8668-201ENSMUST00000120559 1447 ntBASIC25.08■■□□□ 1.61
Ddx54Q8K4L0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
Ddx54Q8K4L0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
Ddx54Q8K4L0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
Ddx54Q8K4L0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Ddx54Q8K4L0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ddx54Q8K4L0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC25.07■■□□□ 1.6
Ddx54Q8K4L0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC25.07■■□□□ 1.6
Ddx54Q8K4L0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ddx54Q8K4L0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC25.07■■□□□ 1.6
Ddx54Q8K4L0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ddx54Q8K4L0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Ddx54Q8K4L0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Ddx54Q8K4L0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
Ddx54Q8K4L0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Ddx54Q8K4L0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx54Q8K4L0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
Ddx54Q8K4L0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx54Q8K4L0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx54Q8K4L0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx54Q8K4L0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx54Q8K4L0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Ddx54Q8K4L0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx54Q8K4L0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx54Q8K4L0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx54Q8K4L0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx54Q8K4L0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC25.05■■□□□ 1.6
Ddx54Q8K4L0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx54Q8K4L0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx54Q8K4L0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx54Q8K4L0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx54Q8K4L0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Ddx54Q8K4L0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx54Q8K4L0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx54Q8K4L0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx54Q8K4L0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx54Q8K4L0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx54Q8K4L0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC25.04■■□□□ 1.6
Ddx54Q8K4L0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx54Q8K4L0 Gm6728-201ENSMUST00000178117 1065 ntBASIC25.04■■□□□ 1.6
Ddx54Q8K4L0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx54Q8K4L0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx54Q8K4L0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx54Q8K4L0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx54Q8K4L0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC25.04■■□□□ 1.6
Ddx54Q8K4L0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx54Q8K4L0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx54Q8K4L0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms